Evidence map›Paper›PMID 19854872›Full record

ArticleRNA (New York, N.Y.)2009

Deadenylation of maternal mRNAs mediated by miR-427 in Xenopus laevis embryos.

Elsebet Lund, Mingzhu Liu, Rebecca S Hartley, Michael D Sheets, James E Dahlberg

Open access · bronzeAbstract read
In one paragraph

Article in RNA (New York, N.Y.), 2009. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 95 papers.

0numbers the graph read from it
0cells of the map it votes in
95citing papers in PubMed
3.6field-weighted citation impact, top 7% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

95 citing papers in PubMed, 176 citations in OpenAlex.

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  19. Insights into Early Ontogenesis ofAnimals : an open access journal from MDPI · 2023
    Article
  20. RNA localization during early development of the axolotl.Frontiers in cell and developmental biology · 2023
    Article

35 more citing papers are in PubMed but not listed here.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

5 authors at 2 institutions in 1 country.

Elsebet LundDepartment of Biomolecular Chemistry, University of Wisconsin School of Medicine and Public Health, Madison, Wisconsin 53706, USA.
Mingzhu Liu
Rebecca S Hartley
Michael D Sheets
James E Dahlberg
University of Wisconsin–Madison · USUniversity of New Mexico · US

Funding

RNAS AND PROTEINS BETWEEN THE NUCLEUS AND CYTOPLASMR37GM030220 · NIGMS · UNIVERSITY OF WISCONSIN MADISON · PI DAHLBERG, JAMES E · 1998 to 2005
$3.1M
Control of Spemann's organizerR01HD043996 · NICHD · UNIVERSITY OF WISCONSIN-MADISON · PI SHEETS, MICHAEL D · 2003 to 2007
$1.3M
STRUCTURE, ORGANIZATION, AND EXPRESSION OF SNRNA GENESR01GM030220 · NIGMS · UNIVERSITY OF WISCONSIN MADISON · PI DAHLBERG, JAMES E · 1985 to 1997
–
NICHD NIH HHS HD-43996NICHD NIH HHS R01 HD043996NIGMS NIH HHS GM-30220NIGMS NIH HHS R37 GM030220
6 · The paper itself

Abstract

We show that microRNA-427 (miR-427) mediates the rapid deadenylation of maternal mRNAs after the midblastula transition (MBT) of Xenopus laevis embryogenesis. By MBT, the stage when the embryonic cell cycle is remodeled and zygotic transcription of mRNAs is initiated, each embryo has accumulated approximately 10(9) molecules of miR-427 processed from multimeric pri-miR-427 transcripts synthesized after fertilization. We demonstrate that the maternal mRNAs for cyclins A1 and B2 each contain a single miR-427 target sequence, spanning less than 30 nucleotides, that is both necessary and sufficient for deadenylation, and that inactivation of miR-427 leads to stabilization of the mRNAs. Although this deadenylation normally takes place after MBT, exogenous miRNAs produced prematurely in vivo can promote deadenylation prior to MBT, indicating that turnover of the maternal mRNAs is limited by the amount of accumulated miR-427. Injected transcripts comprised solely of the cyclin mRNA 3' untranslated regions or bearing a 5' ApppG cap undergo deadenylation, showing that translation of the targeted RNA is not required. miR-427 is not unique in promoting deadenylation, as an unrelated miRNA, let-7, can substitute for miR-427 if the reporter RNA contains an appropriate let-7 target site. We propose that miR-427, like the orthologous miR-430 of zebrafish, functions to down-regulate expression of maternal mRNAs early in development.

Indexed as

3' Untranslated RegionsAdenineAnimalsBase SequenceCyclin B2Gene Expression Regulation, DevelopmentalMicroRNAsMolecular Sequence DataProtein BiosynthesisRNA, MessengerXenopus laevisXenopus Proteins3' Untranslated RegionsAdenineccnb2 protein, XenopusCyclin B2MicroRNAsRNA, MessengerXenopus Proteins

Identifiers

PMID19854872
PMCPMC2779678
OpenAlexW2108284151

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.