Evidence map›Paper›PMID 19853451›Full record

ArticleCurrent biology : CB2009

The C. elegans dosage compensation complex propagates dynamically and independently of X chromosome sequence.

Sevinç Ercan, Lindsay L Dick, Jason D Lieb

Open access · bronzeAbstract read
In one paragraph

Article in Current biology : CB, 2009. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 37 papers.

0numbers the graph read from it
0cells of the map it votes in
37citing papers in PubMed
1.4field-weighted citation impact, top 19% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

37 citing papers in PubMed, 52 citations in OpenAlex.

  1. Article
  2. Sex-specific transcriptome dynamics ofGenes & development · 2025
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  10. Binding of anGenetics · 2019
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  19. Regulation of the X chromosomes in Caenorhabditis elegans.Cold Spring Harbor perspectives in biology · 2014
    Review
  20. Article
4 · The record

Corrections and comments

5 · Who and what money

Authors and funding

3 authors at 1 institution in 1 country.

Sevinç ErcanDepartment of Biology, Carolina Center for Genome Sciences and Lineberger Comprehensive Cancer Center, University of North Carolina at Chapel Hill, Chapel Hill, NC 27599, USA.
Lindsay L Dick
Jason D Lieb
University of North Carolina at Chapel Hill · US

Funding

Identification of DNA Elements Governing Chromatin Function in C elegansU01HG004270 · NHGRI · UNIV OF NORTH CAROLINA CHAPEL HILL · PI LIEB, JASON D · 2007 to 2011
$9.7M
Determinants of X-chromosome transcriptional regulation in C. elegansF32GM084471 · NIGMS · UNIV OF NORTH CAROLINA CHAPEL HILL · PI ERCAN, SEVINC · 2008 to 2008
$50k
NHGRI NIH HHS U01 HG004270NIGMS NIH HHS F32 GM084471NIGMS NIH HHS GM084471
6 · The paper itself

Abstract

backgroundThe C. elegans dosage compensation complex (DCC) associates with both X chromosomes of XX animals to reduce X-linked transcript levels. Five DCC members are homologous to subunits of the evolutionarily conserved condensin complex, and two noncondensin subunits are required for DCC recruitment to X.

resultsWe investigated the molecular mechanism of DCC recruitment and spreading along X by examining gene expression and the binding patterns of DCC subunits in different stages of development, and in strains harboring X;autosome (X;A) fusions. We show that DCC binding is dynamically specified according to gene activity during development and that the mechanism of DCC spreading is independent of X chromosome DNA sequence. Accordingly, in X;A fusion strains, DCC binding propagates from X-linked recruitment sites onto autosomal promoters as a function of distance. Quantitative analysis of spreading suggests that the condensin-like subunits spread from recruitment sites to promoters more readily than subunits involved in initial X targeting.

conclusionsA highly conserved chromatin complex is appropriated to accomplish domain-scale transcriptional regulation during C. elegans development. Unlike X recognition, which is specified partly by DNA sequence, spreading is sequence independent and coupled to transcriptional activity. Similarities to the X recognition and spreading strategies used by the Drosophila DCC suggest mechanisms fundamental to chromosome-scale gene regulation.

Indexed as

X Chromosome InactivationAnimalsCaenorhabditis elegansCaenorhabditis elegans ProteinsDNA, HelminthGene Expression Regulation, DevelopmentalModels, GeneticSequence Analysis, DNAX ChromosomeCaenorhabditis elegans ProteinsDNA, Helminth

Identifiers

PMID19853451
PMCPMC2783177
OpenAlexW2068154042

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Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.