Evidence map›Paper›PMID 19850921›Full record

ArticleThe Journal of biological chemistry2010

REH2 RNA helicase in kinetoplastid mitochondria: ribonucleoprotein complexes and essential motifs for unwinding and guide RNA (gRNA) binding.

Alfredo Hernandez, Bhaskara Reddy Madina, Kevin Ro, James A Wohlschlegel, Belinda Willard, Mike T Kinter, Jorge Cruz-Reyes

Open access · hybridAbstract read
In one paragraph

Article in The Journal of biological chemistry, 2010. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 48 papers.

0numbers the graph read from it
0cells of the map it votes in
48citing papers in PubMed
2.3field-weighted citation impact, top 12% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

48 citing papers in PubMed, 56 citations in OpenAlex.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

7 authors at 3 institutions in 1 country.

Alfredo HernandezDepartment of Biochemistry and Biophysics, Texas A&M University, College Station, Texas 77843, USA.
Bhaskara Reddy Madina
Kevin Ro
James A Wohlschlegel
Belinda Willard
Mike T Kinter
Jorge Cruz-Reyes
Texas A&M University · USCleveland Clinic · USUniversity of California, Los Angeles · US

Funding

Trypansome RNA Editing in Two Developmental FormsR01GM067130 · NIGMS · TEXAS A&M UNIVERSITY SYSTEM · PI CRUZ-REYES, JORGE · 2004 to 2008
$1.1M
NIGMS NIH HHS GM067130NIGMS NIH HHS R01 GM067130
6 · The paper itself

Abstract

Regulation of gene expression in kinetoplastid mitochondria is largely post-transcriptional and involves the orchestration of polycistronic RNA processing, 3'-terminal maturation, RNA editing, turnover, and translation; however, these processes remain poorly studied. Core editing complexes and their U-insertion/deletion activities are relatively well characterized, and a battery of ancillary factors has recently emerged. This study characterized a novel DExH-box RNA helicase, termed here REH2 (RNA editing associated helicase 2), in unique ribonucleoprotein complexes that exhibit unwinding and guide RNA binding activities, both of which required a double-stranded RNA-binding domain (dsRBD) and a functional helicase motif I of REH2. REH2 complexes and recently identified related particles share a multiprotein core but are distinguished by several differential polypeptides. Finally, REH2 associates transiently, via RNA, with editing complexes, mitochondrial ribosomes, and several ancillary factors that control editing and RNA stability. We propose that these putative higher order structures coordinate mitochondrial gene expression.

Indexed as

Amino Acid MotifsAnimalsMitochondriaMitochondrial ProteinsProtein Structure, TertiaryProtozoan ProteinsRibonucleoproteinsRibosomesRNA EditingRNA, Guide, KinetoplastidaRNA HelicasesRNA, ProtozoanRNA StabilityTrypanosoma brucei bruceiMitochondrial ProteinsProtozoan ProteinsRibonucleoproteinsRNA, Guide, KinetoplastidaRNA HelicasesRNA, Protozoan

Identifiers

PMID19850921
PMCPMC2801250
OpenAlexW1970146598

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.