Evidence map›Paper›PMID 19850919›Full record

ArticleThe Journal of biological chemistry2009

Modulating effects of the plug, helix, and N- and C-terminal domains on channel properties of the PapC usher.

Owen S Mapingire, Nadine S Henderson, Guillaume Duret, David G Thanassi, Anne H Delcour

Open access · hybridAbstract read
In one paragraph

Article in The Journal of biological chemistry, 2009. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 26 papers.

0numbers the graph read from it
0cells of the map it votes in
26citing papers in PubMed
2.7field-weighted citation impact, top 11% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

26 citing papers in PubMed, 48 citations in OpenAlex.

  1. Review
  2. Review
  3. Review
  4. Article
  5. Outer membrane protein design.Current opinion in structural biology · 2017
    Review
  6. Article
  7. Article
  8. Global redesign of a native β-barrel scaffold.Biochimica et biophysica acta · 2016
    Article
  9. Review
  10. Article
  11. Article
  12. Article
  13. Molecular basis of usher pore gating in Escherichia coli pilus biogenesis.Proceedings of the National Academy of Sciences of the United States of America · 2013
    Article
  14. Article
  15. Article
  16. Article
  17. Article
  18. Article
  19. Domain activities of PapC usher reveal the mechanism of action of an Escherichia coli molecular machine.Proceedings of the National Academy of Sciences of the United States of America · 2012
    Article
  20. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

5 authors at 2 institutions in 1 country.

Owen S MapingireDepartment of Biology and Biochemistry, University of Houston, Houston, Texas 77204.
Nadine S HendersonCenter for Infectious Diseases, Department of Molecular Genetics and Microbiology, Stony Brook University, Stony Brook, New York 11794.
Guillaume DuretDepartment of Biology and Biochemistry, University of Houston, Houston, Texas 77204.
David G ThanassiCenter for Infectious Diseases, Department of Molecular Genetics and Microbiology, Stony Brook University, Stony Brook, New York 11794. Electronic address: david.thanassi@stonybrook.edu.
Anne H DelcourDepartment of Biology and Biochemistry, University of Houston, Houston, Texas 77204. Electronic address: adelcour@uh.edu.
University of Houston · USStony Brook University · US

Funding

Mechanism of the Usher in Assembly and Secretion of PiliR01GM062987 · NIGMS · STATE UNIVERSITY NEW YORK STONY BROOK · PI David G Thanassi · 2001 to 2026
$7.7M
NIGMS NIH HHS GM062987NIGMS NIH HHS R01 GM062987
6 · The paper itself

Abstract

The chaperone/usher system is one of the best characterized pathways for protein secretion and assembly of cell surface appendages in Gram-negative bacteria. In particular, this pathway is used for biogenesis of the P pilus, a key virulence factor used by uropathogenic Escherichia coli to adhere to the host urinary tract. The P pilus individual subunits bound to the periplasmic chaperone PapD are delivered to the outer membrane PapC usher, which serves as an assembly platform for subunit incorporation into the pilus and secretion of the pilus fiber to the cell surface. PapC forms a dimeric, twin pore complex, with each monomer composed of a 24-stranded transmembrane beta-barrel channel, an internal plug domain that occludes the channel, and globular N- and C-terminal domains that are located in the periplasm. Here we have used planar lipid bilayer electrophysiology to characterize the pore properties of wild type PapC and domain deletion mutants for the first time. The wild type pore is closed most of the time but displays frequent short-lived transitions to various open states. In comparison, PapC mutants containing deletions of the plug domain, an alpha-helix that caps the plug domain, or the N- and C-terminal domains form channels with higher open probability but still exhibiting dynamic behavior. Removal of the plug domain results in a channel with extremely large conductance. These observations suggest that the plug gates the usher channel closed and that the periplasmic domains and alpha-helix function to modulate the gating activity of the PapC twin pore.

Indexed as

Bacterial AdhesionEscherichia coli ProteinsFimbriae, BacterialIon Channel GatingPorinsProtein Structure, QuaternaryProtein Structure, SecondaryProtein Structure, TertiaryUropathogenic Escherichia coliatpG protein, E coliEscherichia coli ProteinsPorins

Identifiers

PMID19850919
PMCPMC2794748
OpenAlexW2112638132

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.