Evidence map›Paper›PMID 19850849›Full record

ReviewCold Spring Harbor symposia on quantitative biology2009

DUF1220 domains, cognitive disease, and human brain evolution.

L Dumas, J M Sikela

Open access · bronzeAbstract readReview
In one paragraph

Review in Cold Spring Harbor symposia on quantitative biology, 2009. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 41 papers.

0numbers the graph read from it
0cells of the map it votes in
41citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

41 citing papers in PubMed, 64 citations in OpenAlex.

  1. Trial
  2. Article
  3. Review
  4. Article
  5. Article
  6. Article
  7. Article
  8. Proteolytic activation of human-specific Olduvai domains by the furin protease.International journal of biological macromolecules · 2023
    Article
  9. Article
  10. Article
  11. Article
  12. Genetic Mechanisms Underlying Cortical Evolution in Mammals.Frontiers in cell and developmental biology · 2021
    Review
  13. Article
  14. Article
  15. Article
  16. Article
  17. Article
  18. Article
  19. Article
  20. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

2 authors at 1 institution in 1 country.

L DumasUniversity of Colorado Denver School of Medicine, Aurora, CO 80045, USA.
J M Sikela
University of Colorado Denver · US

Funding

Genome Variation Underlying Alcohol ActionR01AA011853 · NIAAA · UNIVERSITY OF COLORADO DENVER · PI SIKELA, JAMES M · 1998 to 2013
$4.9M
Investigation of DUF1220 Domains in Human Brain Function and DiseaseR01MH081203 · NIMH · UNIVERSITY OF COLORADO DENVER · PI SIKELA, JAMES M · 2009 to 2013
$2.0M
NIAAA NIH HHS 2 R01 AA11853NIAAA NIH HHS R01 AA011853NIMH NIH HHS R01 MH081203NIMH NIH HHS R01 MH81203
6 · The paper itself

Abstract

We have established that human genome sequences encoding a novel protein domain, DUF1220, show a dramatically elevated copy number in the human lineage (>200 copies in humans vs. 1 in mouse/rat) and may be important to human evolutionary adaptation. Copy-number variations (CNVs) in the 1q21.1 region, where most DUF1220 sequences map, have now been implicated in numerous diseases associated with cognitive dysfunction, including autism, autism spectrum disorder, mental retardation, schizophrenia, microcephaly, and macrocephaly. We report here that these disease-related 1q21.1 CNVs either encompass or are directly flanked by DUF1220 sequences and exhibit a dosage-related correlation with human brain size. Microcephaly-producing 1q21.1 CNVs are deletions, whereas macrocephaly-producing 1q21.1 CNVs are duplications. Similarly, 1q21.1 deletions and smaller brain size are linked with schizophrenia, whereas 1q21.1 duplications and larger brain size are associated with autism. Interestingly, these two diseases are thought to be phenotypic opposites. These data suggest a model which proposes that (1) DUF1220 domain copy number may be involved in influencing human brain size and (2) the evolutionary advantage of rapidly increasing DUF1220 copy number in the human lineage has resulted in favoring retention of the high genomic instability of the 1q21.1 region, which, in turn, has precipitated a spectrum of recurrent human brain and developmental disorders.

Indexed as

Evolution, MolecularGene DosageAnimalsBrainChromosomes, Human, Pair 1Cognition DisordersComparative Genomic HybridizationHominidaeHumansModels, GeneticOrgan SizePhylogenyPrimatesProtein Structure, TertiaryTime Factors

Identifiers

PMID19850849
PMCPMC2902282
OpenAlexW2158455991

What OpenQuestion holds

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Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.