Evidence map›Paper›PMID 19847913›Full record

ArticleProteins2010

Characterization of intrinsically disordered proteins with electrospray ionization mass spectrometry: conformational heterogeneity of alpha-synuclein.

Agya K Frimpong, Rinat R Abzalimov, Vladimir N Uversky, Igor A Kaltashov

Abstract read
In one paragraph

Article in Proteins, 2010. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 48 papers.

0numbers the graph read from it
0cells of the map it votes in
48citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

48 citing papers in PubMed.

  1. Article
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  5. Sizes, conformational fluctuations, and SAXS profiles for intrinsically disordered proteins.Protein science : a publication of the Protein Society · 2025
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

4 authors.

Agya K FrimpongDepartment of Chemistry, University of Massachusetts Amherst, Amherst, MA 01003, USA.
Rinat R Abzalimov
Vladimir N Uversky
Igor A Kaltashov

Funding

Bioinformatics linkage of protein disorder and functionR01LM007688 · NLM · INDIANA UNIV-PURDUE UNIV AT INDIANAPOLIS · PI DUNKER, ALAN KEITH · 2003 to 2006
$1.3M
Mining the Structural Genomics Initiative for DisorderR01GM071714 · NIGMS · INDIANA UNIV-PURDUE UNIV AT INDIANAPOLIS · PI DUNKER, ALAN KEITH · 2006 to 2009
$1.1M
NIGMS NIH HHS GM071714-01A2NIGMS NIH HHS R01 GM071714NLM NIH HHS R01 LM007688
6 · The paper itself

Abstract

Conformational heterogeneity of alpha-synuclein was studied with electrospray ionization mass spectrometry by analyzing protein ion charge state distributions, where the extent of multiple charging reflects compactness of the protein conformations in solution. Although alpha-synuclein lacks a single well-defined structure under physiological conditions, it was found to sample four distinct conformational states, ranging from a highly structured one to a random coil. The compact highly structured state of alpha-synuclein is present across the entire range of conditions tested (pH ranging from 2.5 to 10, alcohol content from 0% to 60%), but is particularly abundant in acidic solutions. The only other protein state populated in acidic solutions is a partially folded intermediate state lacking stable tertiary structure. Another, more compact intermediate state is induced by significant amounts of ethanol used as a co-solvent and appears to represent a partially folded conformation with high beta-sheet content. Protein dimerization is observed throughout the entire range of conditions tested, although only acidic solutions favor formation of highly structured dimers of alpha-synuclein. These dimers are likely to present the earliest stages in protein aggregation leading to globular oligomers and, subsequently, protofibrils.

Indexed as

alpha-SynucleinEthanolHumansHydrogen-Ion ConcentrationProtein ConformationProtein MultimerizationSpectrometry, Mass, Electrospray Ionizationalpha-SynucleinEthanol

Identifiers

PMID19847913
PMCPMC5815318

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.