Evidence map›Paper›PMID 19847388›Full record

ArticleTAG. Theoretical and applied genetics. Theoretische und angewandte Genetik2010

Rdr3, a novel locus conferring black spot disease resistance in tetraploid rose: genetic analysis, LRR profiling, and SCAR marker development.

Vance M Whitaker, James M Bradeen, Thomas Debener, Anja Biber, Stan C Hokanson

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Article in TAG. Theoretical and applied genetics. Theoretische und angewandte Genetik, 2010. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 20 papers.

0numbers the graph read from it
0cells of the map it votes in
20citing papers in PubMed
5.9field-weighted citation impact, top 5% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

20 citing papers in PubMed, 54 citations in OpenAlex.

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  15. Identification of RFLP and NBS/PK profiling markers for disease resistance loci in genetic maps of oats.TAG. Theoretical and applied genetics. Theoretische und angewandte Genetik · 2013
    Article
  16. Article
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  18. Towards a unified genetic map for diploid roses.TAG. Theoretical and applied genetics. Theoretische und angewandte Genetik · 2011
    Article
  19. Article
  20. Molecular markers from a BAC contig spanning the Rdr1 locus: a tool for marker-assisted selection in roses.TAG. Theoretical and applied genetics. Theoretische und angewandte Genetik · 2010
    Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

5 authors at 3 institutions in 2 countries.

Vance M WhitakerDepartment of Horticultural Science, Gulf Coast Research and Education Center, University of Florida, 14625 CR 672, Wimauma, FL 33598, USA. vwhitaker@ufl.edu
James M Bradeen
Thomas Debener
Anja Biber
Stan C Hokanson
Leibniz University Hannover · DEUniversity of Minnesota · USUniversity of Florida · US

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Black spot disease of rose, incited by the fungus Diplocarpon rosae, is found worldwide and is the most important disease of garden roses. A gene-for-gene interaction in this pathosystem is evidenced by the presence of pathogenic races of D. rosae and the previous discovery of a dominant resistance allele at the Rdr1 locus in the diploid Rosa multiflora. The objective of the present study was to genetically analyze resistances to North American black spot races 3, 8, and 9 previously reported in tetraploid roses. Resistance to North American races 3 and 8 segregated 1:1 in multiple F(1) populations, indicating that both are conferred by dominant alleles at single loci and are present in simplex (Rrrr) configuration. Gene pyramiding was demonstrated by combining both resistances into single genotypes. Resistance to race 9 was partial and segregated in a quantitative fashion. Analysis of these populations with microsatellite markers previously developed for Rdr1 revealed that the gene conferring race 3 resistance resides within the same R gene cluster as Rdr1. Race 8 resistance segregated independently and is, therefore, a novel locus for black spot resistance in rose which we have named Rdr3. NBS and LRR profiling were used in a bulked segregant analysis to identify a marker 9.1 cM from Rdr3, which was converted to a SCAR marker form for marker-assisted breeding.

Indexed as

Polymorphism, GeneticPolyploidyAscomycotaBinding SitesChromosome SegregationCrosses, GeneticGenetic LociGenetic MarkersImmunity, InnateLeucine-Rich Repeat ProteinsMicrosatellite RepeatsNorth AmericaNucleotidesPhenotypePlant DiseasesProteinsGenetic MarkersLeucine-Rich Repeat ProteinsNucleotidesProteins

Identifiers

PMID19847388
OpenAlexW1986596072

What OpenQuestion holds

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Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.