Evidence map›Paper›PMID 19846594›Full record

ArticleNucleic acids research2009

Transcriptome profiling defines a novel regulon modulated by the LysR-type transcriptional regulator MexT in Pseudomonas aeruginosa.

Zhe-Xian Tian, Emilie Fargier, Micheál Mac Aogáin, Claire Adams, Yi-Ping Wang, Fergal O'Gara

Open access · goldAbstract read
In one paragraph

Article in Nucleic acids research, 2009. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 56 papers.

0numbers the graph read from it
0cells of the map it votes in
56citing papers in PubMed
3.1field-weighted citation impact, top 8% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

56 citing papers in PubMed, 104 citations in OpenAlex.

  1. Inactivation of MexT inJournal of bacteriology · 2026
    Article
  2. Article
  3. Modulation of themBio · 2025
    Article
  4. Article
  5. Inactivation of MexT inbioRxiv : the preprint server for biology · 2025
    Article
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  11. Improving 5-(hydroxymethyl)furfural (HMF) tolerance ofMetabolic engineering communications · 2024
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  12. Inhibition ofAntimicrobial agents and chemotherapy · 2024
    Article
  13. Article
  14. Three-Year Point Prevalence Survey of Antimicrobial Use in a Chinese University Hospital.The Canadian journal of infectious diseases & medical microbiology = Journal canadien des maladies infectieuses et de la microbiologie medicale · 2024
    Article
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  17. Review
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  20. Microevolution of theFrontiers in microbiology · 2022
    Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors at 2 institutions in 2 countries.

Zhe-Xian TianBIOMERIT Research Centre, Department of Microbiology, University College Cork, Cork, Ireland.
Emilie Fargier
Micheál Mac Aogáin
Claire Adams
Yi-Ping Wang
Fergal O'Gara
University College Cork · IEPeking University · CN

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

The LysR-family regulator MexT modulates the expression of the MexEF-OprN efflux system in the human pathogen Pseudomonas aeruginosa. Recently, we demonstrated that MexT regulates certain virulence phenotypes, including the type-three secretion system and early attachment independent of its role in regulating MexEF-OprN. In this study, transcriptome profiling was utilized to investigate the global nature of MexT regulation in P. aeruginosa PAO1 and an isogenic mexEF mutant. Twelve genes of unknown function were highly induced by overexpressing MexT independent of MexEF-OprN. A well-conserved DNA motif was identified in the upstream regulatory region of nine of these genes and upstream of mexE. Reporter fusion analysis demonstrated that the expression of the genes was significantly induced by MexT in P. aeruginosa and a heterogenous Escherichia coli strain and that the conserved sequence was required for this induction. The conserved DNA motif was further characterized as the MexT binding site by site-directed mutagenesis and electrophoretic mobility shift assays. Genes containing this conserved regulatory sequence were identified across other Pseudomonas species, and their expression was activated by MexT. Thus, a novel regulon directly modulated by MexT, that includes but is independent of mexEF-oprN, has been identified.

Indexed as

Gene Expression Regulation, BacterialRegulonBacterial Outer Membrane ProteinsBacterial ProteinsBase SequenceBinding SitesConserved SequenceGene Expression ProfilingPromoter Regions, GeneticPseudomonasPseudomonas aeruginosaTranscriptional ActivationTranscription FactorsBacterial Outer Membrane ProteinsBacterial ProteinsOprN protein, Pseudomonas aeruginosaTranscription Factors

Identifiers

PMID19846594
PMCPMC2794183
OpenAlexW2054317879

What OpenQuestion holds

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LicenceCC BY-NC
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Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.