Evidence map›Paper›PMID 19846515›Full record

ArticleJournal of virology2010

Different tempo and anatomic location of dual-tropic and X4 virus emergence in a model of R5 simian-human immunodeficiency virus infection.

Wuze Ren, Silvana Tasca, Ke Zhuang, Agegnehu Gettie, James Blanchard, Cecilia Cheng-Mayer

Open access · bronzeAbstract read
In one paragraph

Article in Journal of virology, 2010. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 21 papers.

0numbers the graph read from it
0cells of the map it votes in
21citing papers in PubMed
1.4field-weighted citation impact, top 19% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

21 citing papers in PubMed, 25 citations in OpenAlex.

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  14. The HIV-1 env protein: a coat of many colors.Current HIV/AIDS reports · 2012
    Review
  15. Article
  16. Article
  17. Article
  18. Article
  19. Coreceptor use in nonhuman primate models of HIV infection.Journal of translational medicine · 2011
    Review
  20. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors at 3 institutions in 1 country.

Wuze RenAaron Diamond AIDS Research Center, The Rockefeller University, New York, NY 10016, USA.
Silvana Tasca
Ke Zhuang
Agegnehu Gettie
James Blanchard
Cecilia Cheng-Mayer
Rockefeller University · USAaron Diamond AIDS Research Center · USUniversity Medical Center · US

Funding

ZCM:A NOVEL BROAD-SPECTRUM MICROBICIDE FOR SEXUALLY TRANSMITTED INFECTIONSP51RR000164 · NCRR · TULANE UNIVERSITY OF LOUISIANA · PI VEAZEY, RONALD S. · 1985 to 2011
$100.1M
TRANSMISSION &PATHOGENESIS OF X4 &R5 SHIVSR01AI046980 · NIAID · AARON DIAMOND AIDS RESEARCH CENTER · PI CHENG-MAYER, CECILIA C · 2000 to 2009
$6.0M
Simian Immunodeficiency VIrus PathogenesisR37AI041945 · NIAID · AARON DIAMOND AIDS RESEARCH CENTER · PI CHENG-MAYER, CECILIA C · 2001 to 2010
$5.0M
NCRR NIH HHS P51 RR000164NCRR NIH HHS RR00164.NIAID NIH HHS R01 AI046980NIAID NIH HHS R01AI46980NIAID NIH HHS R37 AI041945NIAID NIH HHS R37AI41945NIMHD NIH HHS L60 MD003100
6 · The paper itself

Abstract

We previously reported coreceptor switch in rhesus macaques inoculated intravenously with R5 simian-human immunodeficiency virus SF162P3N (SHIV(SF162P3N)). Whether R5-to-X4 virus evolution occurs in mucosally infected animals and in which anatomic site the switch occurs, however, were not addressed. We herein report a change in coreceptor preference in macaques infected intrarectally with SHIV(SF162P3N). The switch occurred in infected animals with high levels of virus replication and undetectable antiviral antibody response and required sequence changes in the V3 loop of the gp120 envelope protein. X4 virus emergence was associated with an accelerated drop in peripheral CD4(+) T-cell count but followed rather than preceded the onset of CD4(+) T-cell loss. The conditions, genotypic requirements, and patterns of coreceptor switch in intrarectally infected animals were thus remarkably consistent with those found in macaques infected intravenously. They also overlapped with those reported for humans, suggestive of a common mechanism for coreceptor switch in the two hosts. Furthermore, two independent R5-to-X4 evolutionary pathways were identified in one infected animal, giving rise to dual-tropic and X4 viruses which differed in switch kinetics and tissue localization. The dual-tropic switch event predominated early, and the virus established infection in multiple tissues sites. In contrast, the switch to X4 virus occurred later, initiating and expanding mainly in peripheral lymph nodes. These findings help define R5 SHIV(SF162P3N) infection of rhesus macaques as a model to study the mechanistic basis, dynamics, and sites of HIV-1 coreceptor switch.

Indexed as

Amino Acid SequenceAnimalsCD4 AntigensHIVHIV Envelope Protein gp120HIV InfectionsHumansMacacaReceptors, VirusSimian Acquired Immunodeficiency SyndromeSimian Immunodeficiency VirusTissue DistributionVirus ReplicationCD4 Antigensgp120 protein, Human immunodeficiency virus 1HIV Envelope Protein gp120Receptors, Virus

Identifiers

PMID19846515
PMCPMC2798429
OpenAlexW2103940273

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.