Evidence map›Paper›PMID 19843587›Full record

ArticleJournal of cell science2009

Xenopus delta-catenin is essential in early embryogenesis and is functionally linked to cadherins and small GTPases.

Dongmin Gu, Amy K Sater, Hong Ji, Kyucheol Cho, Melissa Clark, Sabrina A Stratton, Michelle C Barton, Qun Lu, Pierre D McCrea

Open access · greenAbstract read
In one paragraph

Article in Journal of cell science, 2009. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 21 papers.

0numbers the graph read from it
0cells of the map it votes in
21citing papers in PubMed
2.0field-weighted citation impact, top 14% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

21 citing papers in PubMed, 32 citations in OpenAlex.

  1. Article
  2. Article
  3. Delta-Catenin as a Modulator of Rho GTPases in Neurons.Frontiers in cellular neuroscience · 2022
    Review
  4. Article
  5. Article
  6. Disruption ofHGG advances · 2020
    Article
  7. Article
  8. Article
  9. Functional roles of p120ctn family of proteins in central neurons.Seminars in cell & developmental biology · 2017
    Review
  10. Article
  11. Nuclear signaling from cadherin adhesion complexes.Current topics in developmental biology · 2015
    Review
  12. Article
  13. Article
  14. Article
  15. Kazrin, and its binding partners ARVCF- and delta-catenin, are required for Xenopus laevis craniofacial development.Developmental dynamics : an official publication of the American Association of Anatomists · 2011
    Article
  16. Pronephric tubulogenesis requires Daam1-mediated planar cell polarity signaling.Journal of the American Society of Nephrology : JASN · 2011
    Article
  17. Article
  18. Article
  19. Article
  20. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

9 authors at 3 institutions in 1 country.

Dongmin GuDepartment of Biochemistry and Molecular Biology, University of Texas M.D. Anderson Cancer Center, Houston, TX 77030, USA.
Amy K Sater
Hong Ji
Kyucheol Cho
Melissa Clark
Sabrina A Stratton
Michelle C Barton
Qun Lu
Pierre D McCrea
The University of Texas MD Anderson Cancer Center · USEast Carolina University · USUniversity of Houston · US

Funding

Tumor Evolution and Metastasis ProgramP30CA016672 · NCI · UNIVERSITY OF TX MD ANDERSON CAN CTR · PI Scott Kopetz · 1985 to 2026
$290.8M
p120-catenin sub-family functionsR01GM052112 · NIGMS · UNIVERSITY OF TX MD ANDERSON CAN CTR · PI MCCREA, PIERRE D · 1995 to 2010
$3.5M
delta-Catenin and Cell-Cell Adhesion in Prostate CancerR01CA111891 · NCI · EAST CAROLINA UNIVERSITY · PI LU, QUN · 2006 to 2010
$759k
NCI NIH HHS CA-16672NCI NIH HHS P30 CA016672NCI NIH HHS R01 CA111891NIGMS NIH HHS R01 GM052112NIGMS NIH HHS R01 GM52112
6 · The paper itself

Abstract

Catenins of the p120 subclass display an array of intracellular localizations and functions. Although the genetic knockout of mouse delta-catenin results in mild cognitive dysfunction, we found severe effects of its depletion in Xenopus. delta-catenin in Xenopus is transcribed as a full-length mRNA, or as three (or more) alternatively spliced isoforms designated A, B and C. Further structural and functional complexity is suggested by three predicted and alternative translation initiation sites. Transcript analysis suggests that each splice isoform is expressed during embryogenesis, with the B and C transcript levels varying according to developmental stage. Unlike the primarily neural expression of delta-catenin reported in mammals, delta-catenin is detectable in most adult Xenopus tissues, although it is enriched in neural structures. delta-catenin associates with classical cadherins, with crude embryo fractionations further revealing non-plasma-membrane pools that might be involved in cytoplasmic and/or nuclear functions. Depletion of delta-catenin caused gastrulation defects, phenotypes that were further enhanced by co-depletion of the related p120-catenin. Depletion was significantly rescued by titrated p120-catenin expression, suggesting that these catenins have shared roles. Biochemical assays indicated that delta-catenin depletion results in reduced cadherin levels and cell adhesion, as well as perturbation of RhoA and Rac1. Titrated doses of C-cadherin, dominant-negative RhoA or constitutively active Rac1 significantly rescued delta-catenin depletion. Collectively, our experiments indicate that delta-catenin has an essential role in amphibian development, and has functional links to cadherins and Rho-family GTPases.

Indexed as

Alternative SplicingAnimalsBase SequenceCadherinsCateninsCell AdhesionDelta CateninEmbryo, NonmammalianGastrulaGastrulationGene Knockout TechniquesMolecular Sequence DataNeurulationrac1 GTP-Binding ProteinrhoA GTP-Binding ProteinXenopus laevisCadherinsCateninsDelta Cateninrac1 GTP-Binding ProteinrhoA GTP-Binding Protein

Identifiers

PMID19843587
PMCPMC2776500
OpenAlexW2120114376

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.