Evidence map›Paper›PMID 19843576›Full record

ArticleJournal of leukocyte biology2010

Antagonistic roles of four SR proteins in the biosynthesis of alternatively spliced tissue factor transcripts in monocytic cells.

Sajiv Chandradas, Gintaras Deikus, Jonathan G Tardos, Vladimir Y Bogdanov

Abstract read
In one paragraph

Article in Journal of leukocyte biology, 2010. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 15 papers.

0numbers the graph read from it
0cells of the map it votes in
15citing papers in PubMed
1.6field-weighted citation impact, top 17% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

15 citing papers in PubMed, 26 citations in OpenAlex.

  1. Review
  2. Review
  3. Review
  4. Article
  5. Review
  6. Article
  7. Article
  8. Alternatively spliced tissue factor promotes breast cancer growth in a β1 integrin-dependent manner.Proceedings of the National Academy of Sciences of the United States of America · 2013
    Article
  9. Article
  10. Article
  11. Article
  12. Article
  13. Article
  14. Article
  15. [Advances of tissue factor in lung cancer].Zhongguo fei ai za zhi = Chinese journal of lung cancer · 2010
    Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

4 authors at 3 institutions in 1 country.

Sajiv ChandradasDepartment of Medicine, Mount Sinai School of Medicine, New York, NY, USA.
Gintaras Deikus
Jonathan G Tardos
Vladimir Y Bogdanov
Icahn School of Medicine at Mount Sinai · USMount Sinai Beth Israel · USUniversity of Cincinnati Medical Center · US

Funding

Expression of Alternatively Spliced Human Tissue FactorK01DK065752 · NIDDK · MOUNT SINAI SCHOOL OF MEDICINE OF NYU · PI BOGDANOV, VLADIMIR · 2005 to 2008
$454k
NIDDK NIH HHS DK065752NIDDK NIH HHS K01 DK065752
6 · The paper itself

Abstract

Following recruitment to solid tissues, peripheral blood monocytes express a number of proinflammatory molecules including TF, a trigger of coagulation that also promotes cell-cell interactions and tissue remodeling. Monocytes express two forms of TF: flTF, a highly coagulant transmembrane form, and asTF, a highly proangiogenic, soluble TF form. Biosynthesis of the two TF forms occurs via alternative processing of exon 5 during pre-mRNA splicing. Its inclusion results in flTF mRNA and its exclusion, asTF mRNA. We developed a splicing reporter system recently and determined that two spliceosomal constituents, SR proteins ASF/SF2 and SRp55, play a pivotal role in exon 5 inclusion. In this report, we show for the first time that two other SR proteins expressed in human monocytes, SRp40 and SC35, antagonize ASF/SF2 and SRp55 by competing for binding to certain sites in exon 5, thereby promoting TF exon 5 exclusion, an event unique to asTF biosynthesis. We also show that the intron preceding TF exon 5 possesses characteristics rarely found in U2 introns. Our findings indicate that modulation of TF pre-mRNA splicing can be accomplished via modification of SR proteins' activity, facilitating development of novel therapeutic strategies to modulate the "TF profile" of monocytes/macrophages.

Indexed as

Alternative SplicingApoenzymesBinding, CompetitiveCell LineExonsGenes, ReporterHumansMonocytesMutagenesis, Site-DirectedNuclear ProteinsPhosphoproteinsRecombinant Fusion ProteinsRibonucleoproteinsRNA-Binding ProteinsRNA PrecursorsSerine-Arginine Splicing FactorsApoenzymesF3 protein, humanNuclear ProteinsPhosphoproteinsRecombinant Fusion ProteinsRibonucleoproteinsRNA-Binding ProteinsRNA PrecursorsSerine-Arginine Splicing FactorsSRSF2 protein, humanSRSF6 protein, humanThromboplastin

Identifiers

PMID19843576
PMCPMC3210563
OpenAlexW2169872632

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.