Evidence map›Paper›PMID 19843459›Full record

ArticleBiophysical journal2009

Curvature generation and pressure profile modulation in membrane by lysolipids: insights from coarse-grained simulations.

Jejoong Yoo, Qiang Cui

Abstract read
In one paragraph

Article in Biophysical journal, 2009. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 41 papers.

0numbers the graph read from it
0cells of the map it votes in
41citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

41 citing papers in PubMed.

  1. Review
  2. Article
  3. Article
  4. Article
  5. Asymmetric Nature of MscL Opening Revealed by Molecular Dynamics Simulations.Journal of chemical information and modeling · 2025
    Article
  6. Review
  7. Article
  8. Review
  9. Review
  10. Polymodal Control of TMEM16x Channels and Scramblases.International journal of molecular sciences · 2022
    Review
  11. Article
  12. Article
  13. Article
  14. The MscS-like channel YnaI has a gating mechanism based on flexible pore helices.Proceedings of the National Academy of Sciences of the United States of America · 2020
    Article
  15. Article
  16. Remembering Mechanosensitivity of NMDA Receptors.Frontiers in cellular neuroscience · 2019
    Review
  17. Review
  18. Asymmetric mechanosensitivity in a eukaryotic ion channel.Proceedings of the National Academy of Sciences of the United States of America · 2017
    Article
  19. Phospholipase A activity of adenylate cyclase toxin mediates translocation of its adenylate cyclase domain.Proceedings of the National Academy of Sciences of the United States of America · 2017
    Article
  20. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

2 authors.

Jejoong YooGraduate Program in Biophysics, University of Wisconsin at Madison, Madison, Wisconsin, USA.
Qiang Cui

Funding

Coupling between conformation and chemistry in enzymesR01GM071428 · NIGMS · UNIVERSITY OF WISCONSIN-MADISON · PI CUI, QIANG · 2005 to 2009
$976k
NIGMS NIH HHS R01 GM071428NIGMS NIH HHS R01-GM071428
6 · The paper itself

Abstract

Although many membrane additives are known to modulate the activities of membrane proteins via perturbing the properties of lipid membrane, the underlying mechanism is often not precisely understood. In this study, we investigate the impact of asymmetrically incorporating single-tailed lysophosphatidylcholine (LPC) into a membrane bilayer using coarse-grained molecular dynamics simulations. Using a simple computational protocol designed to approximately mimic a micropipette setting, we show that asymmetric incorporation of LPC can lead to significant curvature in a bilayer. Detailed analysis of geometrical and mechanical properties (pressure profile) of the resulting mound structure indicates that the degree of pressure profile perturbation is determined not by the local curvature per se but by the packing of lipid headgroups (i.e., area-per-lipid). The findings help provide a concrete basis for understanding the activation mechanism of mechanosensitive channels by asymmetric incorporation of LPC into membrane patches in patch-clamp experiments. The calculated local pressure profiles are valuable to the construction of realistic membrane models for the analysis of mechanosensation in a continuum mechanics framework.

Indexed as

Computer SimulationModels, BiologicalPressureAlgorithmsCholesterolLipid BilayersLysophosphatidylcholinesMembrane Transport ProteinsPhosphatidylcholinesSurface TensionTemperatureVideo Recording1,2-oleoylphosphatidylcholineCholesterolLipid BilayersLysophosphatidylcholinesMembrane Transport ProteinsPhosphatidylcholines

Identifiers

PMID19843459
PMCPMC2764077

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.