Evidence map›Paper›PMID 19840771›Full record

ArticleBiochimica et biophysica acta2009

Functional characterization of a Na(+)-coupled dicarboxylate transporter from Bacillus licheniformis.

Melodie A Strickler, Jason A Hall, Olga Gaiko, Ana M Pajor

Abstract read
In one paragraph

Article in Biochimica et biophysica acta, 2009. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 12 papers.

0numbers the graph read from it
0cells of the map it votes in
12citing papers in PubMed
0.6field-weighted citation impact, top 28% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

12 citing papers in PubMed, 16 citations in OpenAlex.

  1. Article
  2. Article
  3. Article
  4. Article
  5. Structure and Mechanism of the Divalent Anion/Na⁺ Symporter.International journal of molecular sciences · 2019
    Review
  6. Article
  7. Article
  8. Article
  9. Sodium-coupled dicarboxylate and citrate transporters from the SLC13 family.Pflugers Archiv : European journal of physiology · 2014
    Review
  10. Article
  11. Article
  12. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

4 authors at 2 institutions in 1 country.

Melodie A StricklerSkaggs School of Pharmacy and Pharmaceutical Sciences, University of California-San Diego, La Jolla, CA 92093-0718, USA.
Jason A Hall
Olga Gaiko
Ana M Pajor
University of California San Diego · USUniversity of California, Berkeley · US

Funding

MOLECULAR MECHANISM OF RENAL NA+-DEPENDENT COTRANSPORTR01DK046269 · NIDDK · UNIVERSITY OF TEXAS MEDICAL BR GALVESTON · PI PAJOR, ANA M · 1993 to 2010
$3.5M
NIDDK NIH HHS DK46269NIDDK NIH HHS R01 DK046269
6 · The paper itself

Abstract

The Na(+)-coupled dicarboxylate transporter, SdcL, from Bacillus licheniformis is a member of the divalent anion/Na(+) symporter (DASS) family that includes the bacterial Na(+)/dicarboxylate cotransporter SdcS (from Staphyloccocus aureus) and the mammalian Na(+)/dicarboxylate cotransporters, NaDC1 and NaDC3. The transport properties of SdcL produced in Escherichia coli are similar to those of its prokaryotic and eukaryotic counterparts, involving the Na(+)-dependent transport of dicarboxylates such as succinate or malate across the cytoplasmic membrane with a K(m) of approximately 6 microM. SdcL may also transport aspartate, alpha-ketoglutarate and oxaloacetate with low affinity. The cotransport of Na(+) and dicarboxylate by SdcL has an apparent stoichiometry of 2:1, and a K(0.5) for Na(+) of 0.9 mM. Our findings represent the characterization of another prokaryotic protein of the DASS family with transport properties similar to its eukaryotic counterparts, but with a broader substrate specificity than other prokaryotic DASS family members. The broader range of substrates carried by SdcL may provide insight into domains of the protein that allow a more flexible or larger substrate binding pocket.

Indexed as

BacillusBacterial ProteinsBinding SitesCell MembraneDicarboxylic AcidsDicarboxylic Acid TransportersEscherichia coliIon TransportRecombinant ProteinsSequence Homology, Amino AcidSodiumStaphylococcus aureusBacterial ProteinsDicarboxylic AcidsDicarboxylic Acid TransportersRecombinant ProteinsSodium

Identifiers

PMID19840771
PMCPMC2787743
OpenAlexW2006189533

What OpenQuestion holds

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Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.