Evidence map›Paper›PMID 19839760›Full record

ArticleFoodborne pathogens and disease2010

Detection of Escherichia coli enteropathogens by multiplex polymerase chain reaction from children's diarrheal stools in two Caribbean-Colombian cities.

Oscar G Gómez-Duarte, Octavio Arzuza, Delfina Urbina, Jing Bai, Julio Guerra, Oscar Montes, Marta Puello, Ketty Mendoza, Gregorio Y Castro

Abstract read
In one paragraph

Article in Foodborne pathogens and disease, 2010. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 27 papers.

0numbers the graph read from it
0cells of the map it votes in
27citing papers in PubMed
1.0field-weighted citation impact, top 27% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

27 citing papers in PubMed, 61 citations in OpenAlex.

  1. Article
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  4. Description of extraintestinal pathogenicIranian journal of microbiology · 2023
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  13. DiarrheagenicThe Canadian journal of infectious diseases & medical microbiology = Journal canadien des maladies infectieuses et de la microbiologie medicale · 2018
    Article
  14. Article
  15. Gastroenterology and hepatology from bed to bench · 2017
    Article
  16. Article
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

9 authors at 1 institution in 1 country.

Oscar G Gómez-DuarteDepartment of Pediatrics, University of Iowa Children's Hospital, Iowa City, Iowa 52242, USA. oscar-gomez@uiowa.edu
Octavio Arzuza
Delfina Urbina
Jing Bai
Julio Guerra
Oscar Montes
Marta Puello
Ketty Mendoza
Gregorio Y Castro
University of Iowa Stead Family Children’s Hospital · US

Funding

Function of Longus Type IV pili in enterotoxigenic E coliK08AI079410 · NIAID · UNIVERSITY OF IOWA · PI GOMEZ, OSCAR G · 2008 to 2010
$382k
NIAID NIH HHS K08 AI079410PHS HHS NIH K08PHS HHS NIH K12
6 · The paper itself

Abstract

Acute diarrheal disease is a leading cause of childhood morbidity and mortality in the developing world and Escherichia coli intestinal pathogens are important causative agents. Information on the epidemiology of E. coli intestinal pathogens and their association with diarrheal disease is limited because no diagnostic testing is available in countries with limited resources. To evaluate the prevalence of E. coli intestinal pathogens in a Caribbean-Colombian region, E. coli clinical isolates from children with diarrhea were analyzed by a recently reported two-reaction multiplex polymerase chain reaction (Gomez-Duarte et al., Diagn Microbiol Infect Dis 2009;63:1-9). The phylogenetic group from all E. coli isolates was also typed by a single-reaction multiplex polymerase chain reaction. We found that among 139 E. coli strains analyzed, 20 (14.4%) corresponded to E. coli diarrheagenic pathotypes. Enterotoxigenic, shiga-toxin-producing, enteroaggregative, diffuse adherent, and enteropathogenic E. coli pathotypes were detected, and most of them belonged to the phylogenetic groups A and B1, known to be associated with intestinal pathogens. This is the first report on the molecular characterization of E. coli diarrheogenic isolates in Colombia and the first report on the potential role of E. coli in childhood diarrhea in this geographic area.

Indexed as

Age FactorsChild, PreschoolColombiaDiarrheaDNA, BacterialEnteropathogenic Escherichia coliEnterotoxigenic Escherichia coliEscherichia coliEscherichia coli InfectionsFecesFood MicrobiologyHumansInfantInfant, NewbornPhylogenyPolymerase Chain ReactionDNA, Bacterial

Identifiers

PMID19839760
PMCPMC2904504
OpenAlexW1965921854

What OpenQuestion holds

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LicenceTDM
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.