Evidence map›Paper›PMID 19839759›Full record

ArticleFoodborne pathogens and disease2009

Campylobacter excreted into the environment by animal sources: prevalence, concentration shed, and host association.

Iain D Ogden, John F Dallas, Marion MacRae, Ovidiu Rotariu, Kenny W Reay, Malcolm Leitch, Ann P Thomson, Samuel K Sheppard, Martin Maiden, Ken J Forbes and 1 more

Abstract readComparative Study
In one paragraph

Article in Foodborne pathogens and disease, 2009. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 41 papers, 3 of them syntheses that pooled it.

0numbers the graph read from it
0cells of the map it votes in
41citing papers in PubMed, 3 pooled it
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

41 citing papers in PubMed, 3 syntheses or guidelines pooled it.

  1. A systematic review of source attribution of human campylobacteriosis using multilocus sequence typing.Euro surveillance : bulletin Europeen sur les maladies transmissibles = European communicable disease bulletin · 2019
    Pooled it
  2. Pooled it
  3. Pooled it
  4. AcceleratingProceedings of the National Academy of Sciences of the United States of America · 2026
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  8. Fluoroquinolone-resistantJAC-antimicrobial resistance · 2024
    Article
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  10. Comparative Analysis ofPathogens (Basel, Switzerland) · 2023
    Article
  11. A Systematic Review on the Role of Wildlife as Carriers and Spreaders ofAnimals : an open access journal from MDPI · 2023
    Review
  12. Article
  13. Article
  14. Article
  15. Article
  16. Article
  17. Prevalence, Risk Factors, and Molecular Detection ofPathogens (Basel, Switzerland) · 2021
    Article
  18. Article
  19. Agricultural intensification and the evolution of host specialism in the enteric pathogenProceedings of the National Academy of Sciences of the United States of America · 2020
    Article
  20. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

11 authors.

Iain D OgdenDepartment of Medical Microbiology, School of Medicine, University of Aberdeen, Aberdeen, UK.
John F Dallas
Marion MacRae
Ovidiu Rotariu
Kenny W Reay
Malcolm Leitch
Ann P Thomson
Samuel K Sheppard
Martin Maiden
Ken J Forbes
Norval J C Strachan

Funding

Wellcome Trust 047072
6 · The paper itself

Abstract

An intensive study of 443 isolates of Campylobacter jejuni and Campylobacter coli from 2031 fecal samples excreted by animal sources including cattle, sheep, and pigs, a range of wild and domesticated avian species and pets is described. The prevalence found in the majority of animal sources ranged from 22% to 28% with poultry being highest at 41% and cats and dogs lowest (<5%). The average count excreted for each animal source was found not to be significantly different ranging from approximately 10(2) to 10(5) cfu/g. Multilocus sequence typing (MLST) identified phylogenies that exhibited host specificity. A number of clonal complexes (CCs) and sequence types (STs) were characteristic of particular hosts (e.g., CC-179, ST-637, and ST-1341 found only in pigeons and gulls). Analysis of genetic distance demonstrated numerous significant differences in the distribution of MLST types (CC, ST, and allele) between animal sources. Host association was quantified using structure that correctly assigned the nine animal sources with accuracies of 28%, 24%, and 55% at the CC, ST, and allele levels, respectively. This is substantially higher than would be expected by random allocation (11%) but farmyard poultry had the lowest assignment accuracy (13%, 13%, and 21%) suggesting that isolates were shared with a wide range of other animals. This study demonstrates the link between MLST type and host and provides data that can be used in risk assessment and food attribution models. Further, it demonstrates the applicability of MLST to characterize Campylobacter strains from a broad range of environmental sources.

Indexed as

AnimalsAnimals, DomesticAnimals, WildBacterial SheddingBacterial Typing TechniquesBirdsCampylobacterCampylobacter coliCampylobacter jejuniColony Count, MicrobialCross-Sectional StudiesDisease ReservoirsFecesFoodborne DiseasesHaplotypesHost-Pathogen Interactions

Identifiers

PMID19839759
PMCPMC3985071

What OpenQuestion holds

Textmetadata
LicenceTDM
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.