Evidence map›Paper›PMID 19837803›Full record

ArticleJournal of bacteriology2009

Polyphosphate accumulation in Escherichia coli in response to defects in DNA metabolism.

Luciana Amado, Andrei Kuzminov

Abstract read
In one paragraph

Article in Journal of bacteriology, 2009. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 5 papers.

0numbers the graph read from it
0cells of the map it votes in
5citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

5 citing papers in PubMed.

  1. Article
  2. Article
  3. Polyphosphate granule biogenesis is temporally and functionally tied to cell cycle exit during starvation inProceedings of the National Academy of Sciences of the United States of America · 2017
    Article
  4. Article
  5. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

2 authors.

Luciana AmadoDepartment of Microbiology, University of Illinois at Urbana-Champaign, Urbana, Illinois, USA.
Andrei Kuzminov

Funding

Chromosomal death due to misincorporation of wrong material into DNAR01GM073115 · NIGMS · UNIVERSITY OF ILLINOIS AT URBANA-CHAMPAIGN · PI KUZMINOV, ANDREI · 2007 to 2022
$3.6M
Minority Predoctoral Fellowship ProgramF31GM075425 · NIGMS · UNIVERSITY OF ILLINOIS URBANA-CHAMPAIGN · PI AMADO, LUCIANA · 2005 to 2007
$131k
NIGMS NIH HHS F31 GM075425NIGMS NIH HHS F31GM075425NIGMS NIH HHS GM 073115NIGMS NIH HHS R01 GM073115
6 · The paper itself

Abstract

Phenol-chloroform extraction of [(32)P]orthophosphate-labeled Escherichia coli cells followed by alkaline gel electrophoresis revealed, besides the expected chromosomal DNA, two non-DNA species that we have identified as lipopolysaccharides and polyphosphates by using a combination of biochemical and genetic techniques. We used this serendipitously found straightforward protocol for direct polyphosphate detection to quantify polyphosphate levels in E. coli mutants with diverse defects in the DNA metabolism. We detected increased polyphosphate accumulation in the ligA, ligA recBCD, dut ung, and thyA mutants. Polyphosphate accumulation may thus be an indicator of general DNA stress.

Indexed as

DNAEscherichia coliEscherichia coli ProteinsGene DeletionPolyphosphatesDNAEscherichia coli ProteinsPolyphosphates

Identifiers

PMID19837803
PMCPMC2786612

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.