Evidence map›Paper›PMID 19837034›Full record

ArticleCell2009

Structural insight into processive human mitochondrial DNA synthesis and disease-related polymerase mutations.

Young-Sam Lee, W Dexter Kennedy, Y Whitney Yin

Erratum issuedAbstract read
In one paragraph

Article in Cell, 2009. The graph could read no effect estimate from its abstract, so it casts no vote on the map. An erratum has been issued. Cited by 132 papers, 1 of them a synthesis that pooled it.

0numbers the graph read from it
0cells of the map it votes in
132citing papers in PubMed, 1 pooled it
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

132 citing papers in PubMed, 1 synthesis or guideline pooled it.

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  18. Structural basis for DNA proofreading.Nature communications · 2023
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  20. Article

72 more citing papers are in PubMed but not listed here.

4 · The record

Corrections and comments

5 · Who and what money

Authors and funding

3 authors.

Young-Sam LeeInstitute for Cellular and Molecular Biology, University of Texas at Austin, Austin, TX 78712, USA.
W Dexter Kennedy
Y Whitney Yin

Funding

Mechanism of mitochondrial DNA replicationR01GM044613 · NIGMS · UNIVERSITY OF TEXAS AUSTIN · PI JOHNSON, KENNETH ALLEN · 1991 to 2011
$4.3M
Studies of toxicities of HIV RT inhibitors to human mitochondrial DNA polymeraseR01GM083703 · NIGMS · UNIVERSITY OF TEXAS MED BR GALVESTON · PI YIN, YUHUI · 2008 to 2012
$1.3M
NIGMS NIH HHS GM044613NIGMS NIH HHS GM083703NIGMS NIH HHS R01 GM044613NIGMS NIH HHS R01 GM083703
6 · The paper itself

Abstract

Human mitochondrial DNA polymerase (Pol gamma) is the sole replicase in mitochondria. Pol gamma is vulnerable to nonselective antiretroviral drugs and is increasingly associated with mutations found in patients with mitochondriopathies. We determined crystal structures of the human heterotrimeric Pol gamma holoenzyme and, separately, a variant of its processivity factor, Pol gammaB. The holoenzyme structure reveals an unexpected assembly of the mitochondrial DNA replicase where the catalytic subunit Pol gammaA interacts with its processivity factor primarily via a domain that is absent in all other DNA polymerases. This domain provides a structural module for supporting both the intrinsic processivity of the catalytic subunit alone and the enhanced processivity of holoenzyme. The Pol gamma structure also provides a context for interpreting the phenotypes of disease-related mutations in the polymerase and establishes a foundation for understanding the molecular basis of toxicity of anti-retroviral drugs targeting HIV reverse transcriptase.

Indexed as

DNA ReplicationAmino Acid SequenceCrystallography, X-RayDNA-Directed DNA PolymeraseDNA, MitochondrialDNA Polymerase gammaHumansModels, MolecularMolecular Sequence DataNervous System DiseasesSequence AlignmentDNA-Directed DNA PolymeraseDNA, MitochondrialDNA Polymerase gamma

Identifiers

PMID19837034
PMCPMC3018533

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Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.