Evidence map›Paper›PMID 19836403›Full record

ArticleJournal of molecular biology2009

Crystal Structures of the histidine acid phosphatase from Francisella tularensis provide insight into substrate recognition.

Harkewal Singh, Richard L Felts, Jonathan P Schuermann, Thomas J Reilly, John J Tanner

Open access · greenAbstract read
In one paragraph

Article in Journal of molecular biology, 2009. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 11 papers.

0numbers the graph read from it
0cells of the map it votes in
11citing papers in PubMed
0.5field-weighted citation impact, top 33% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

11 citing papers in PubMed, 18 citations in OpenAlex.

  1. Structural basis of secreted acid phosphatase polymerization in the Leishmania parasite.Protein science : a publication of the Protein Society · 2026
    Article
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  3. Article
  4. ExploringPlants (Basel, Switzerland) · 2024
    Article
  5. Article
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  7. Article
  8. Article
  9. Proline: Mother Nature's cryoprotectant applied to protein crystallography.Acta crystallographica. Section D, Biological crystallography · 2012
    Article
  10. Article
  11. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

5 authors at 2 institutions in 1 country.

Harkewal SinghDepartment of Chemistry, University of Missouri-Columbia, Columbia, MO 65211, USA.
Richard L Felts
Jonathan P Schuermann
Thomas J Reilly
John J Tanner
University of Missouri · USCornell University · US

Funding

Virology and Smallpox VaccinationsU54AI057160 · NIAID · WASHINGTON UNIVERSITY · PI RAY, RANJIT · 2003 to 2013
$80.9M
Y-FAMILY POLYMERASES AND CO-FACTORS IN TRANSLESION REPLICATIONP41RR015301 · NCRR · CORNELL UNIVERSITY ITHACA · PI EISENBERG, DAVID · 2001 to 2011
$28.2M
From Clinic to Bench & Back: Clinical Biodetective Training (RMI)R90DK071510 · NIDDK · UNIVERSITY OF MISSOURI-COLUMBIA · PI MILANICK, MARK A · 2004 to 2008
$924k
NCRR NIH HHS P41 RR015301NCRR NIH HHS RR-15301NIAID NIH HHS U54 AI057160NIDDK NIH HHS DK071510NIDDK NIH HHS R90 DK071510
6 · The paper itself

Abstract

Histidine acid phosphatases catalyze the transfer of a phosphoryl group from phosphomonoesters to water at acidic pH using an active-site histidine. The histidine acid phosphatase from the category A pathogen Francisella tularensis (FtHAP) has been implicated in intramacrophage survival and virulence, motivating interest in understanding the structure and mechanism of this enzyme. Here, we report a structure-based study of ligand recognition by FtHAP. The 1.70-A-resolution structure of FtHAP complexed with the competitive inhibitor l(+)-tartrate was solved using single-wavelength anomalous diffraction phasing. Structures of the ligand-free enzyme and the complex with inorganic phosphate were determined at resolutions of 1.85 and 1.70 A, respectively. The structure of the Asp261Ala mutant enzyme complexed with the substrate 3'-AMP was determined at 1.50 A resolution to gain insight into substrate recognition. FtHAP exhibits a two-domain fold similar to that of human prostatic acid phosphatase, consisting of an alpha/beta core domain and a smaller domain that caps the core domain. The structures show that the core domain supplies the phosphoryl binding site, catalytic histidine (His17), and an aspartic acid residue (Asp261) that protonates the leaving group, while the cap domain contributes residues that enforce substrate preference. FtHAP and human prostatic acid phosphatase differ in the orientation of the crucial first helix of the cap domain, implying differences in the substrate preferences of the two enzymes. 3'-AMP binds in one end of a 15-A-long tunnel, with the adenine clamped between Phe23 and Tyr135, and the ribose 2'-hydroxyl interacting with Gln132. The importance of the clamp is confirmed with site-directed mutagenesis; mutation of Phe23 and Tyr135 individually to Ala increases K(m) by factors of 7 and 10, respectively. The structural data are consistent with a role for FtHAP in scavenging phosphate from small molecules present in host macrophage cells.

Indexed as

Acid PhosphataseAmino Acid SubstitutionCrystallography, X-RayEnzyme InhibitorsFrancisella tularensisHumansModels, MolecularMutant ProteinsMutation, MissenseOrganophosphatesProtein BindingProtein Structure, TertiaryTartratesAcid PhosphataseEnzyme InhibitorsMutant ProteinsOrganophosphatestartaric acidTartrates

Identifiers

PMID19836403
PMCPMC2789666
OpenAlexW2084185950

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.