Evidence map›Paper›PMID 19835837›Full record

ArticleBiochimica et biophysica acta2010

NMR characterization of copper and lipid interactions of the C2B domain of synaptotagmin I-relevance to the non-classical secretion of the human acidic fibroblast growth factor (hFGF-1).

Karuppanan Muthusamy Kathir, Li Gao, Dakshinamurthy Rajalingam, Anna E Daily, Sherri Brixey, Huimin Liu, Dan Davis, Paul Adams, Igor Prudovsky, Thallapuranam Krishnaswamy Suresh Kumar

Open access · greenAbstract read
In one paragraph

Article in Biochimica et biophysica acta, 2010. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 6 papers.

0numbers the graph read from it
0cells of the map it votes in
6citing papers in PubMed
0.1field-weighted citation impact, top 46% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

6 citing papers in PubMed, 11 citations in OpenAlex.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

10 authors at 2 institutions in 1 country.

Karuppanan Muthusamy KathirDepartment of Chemistry and Biochemistry, University of Arkansas, Fayetteville, AR 72701, USA.
Li Gao
Dakshinamurthy Rajalingam
Anna E Daily
Sherri Brixey
Huimin Liu
Dan Davis
Paul Adams
Igor Prudovsky
Thallapuranam Krishnaswamy Suresh Kumar
University of Arkansas at Fayetteville · USMaine Medical Center · US

Funding

Structure based drug discoveryP20RR015569 · NCRR · UNIVERSITY OF ARKANSAS AT FAYETTEVILLE · PI MILLETT, FRANCIS S · 2000 to 2009
$21.4M
Transcriptional Decisions in Endothelial Cell DifferentiationP20RR015555 · NCRR · MAINE MEDICAL CENTER · PI FRIESEL, ROBERT E · 2000 to 2009
$21.4M
THE PATHOLOGY OF HUMAN ENDOTHELIAL CELL PHENOTYPESR01HL035627 · NHLBI · MELOY LABORATORIES, INC. · PI PRUDOVSKY, IGOR · 1985 to 2010
$2.3M
Biophysical studies of oncogenic Cdc42Hs constructsK01CA113753 · NCI · UNIVERSITY OF ARKANSAS AT FAYETTEVILLE · PI ADAMS, PAUL DAMIEN · 2007 to 2011
$769k
NCI NIH HHS 1-K01-CA113753-01A2NCI NIH HHS K01 CA113753NCRR NIH HHS P20 RR015555NCRR NIH HHS P20 RR015569NCRR NIH HHS P20 RR15569NCRR NIH HHS RR15555NHLBI NIH HHS HL 35627NHLBI NIH HHS HL35627NHLBI NIH HHS R01 HL035627
6 · The paper itself

Abstract

Human fibroblast growth factor (hFGF-1) is a approximately 17 kDa heparin binding cytokine. It lacks the conventional hydrophobic N-terminal signal sequence and is secreted through non-classical secretion routes. Under stress, hFGF-1 is released as a multiprotein complex consisting of hFGF-1, S100A13 (a calcium binding protein), and p40 synaptotagmin (Syt1). Copper (Cu(2+)) is shown to be required for the formation of the multiprotein hFGF-1 release complex (Landriscina et al. ,2001; Di Serio et al., 2008). Syt1, containing the lipid binding C2B domain, is believed to play an important role in the eventual export of the hFGF-1 across the lipid bilayer. In this study, we characterize Cu(2+) and lipid interactions of the C2B domain of Syt1 using multidimensional NMR spectroscopy. The results highlight how Cu(2+) appears to stabilize the protein bound to pS vesicles. Cu(2+) and lipid binding interface mapped using 2D (1)H-(15)N heteronuclear single quantum coherence experiments reveal that residues in beta-strand I contributes to the unique Cu(2+) binding site in the C2B domain. In the absence of metal ions, residues located in Loop II and beta-strand IV contribute to binding to unilamelar pS vesicles. In the presence of Cu(2+), additional residues located in Loops I and III appear to stabilize the protein-lipid interactions. The results of this study provide valuable information towards understanding the molecular mechanism of the Cu(2+)-induced non-classical secretion of hFGF-1.

Indexed as

CopperFibroblast Growth Factor 1HumansLipid BilayersMembrane LipidsMultiprotein ComplexesNuclear Magnetic Resonance, BiomolecularProtein Structure, QuaternaryProtein Structure, SecondarySynaptotagmin ICopperFibroblast Growth Factor 1Lipid BilayersMembrane LipidsMultiprotein ComplexesSynaptotagmin ISYT1 protein, human

Identifiers

PMID19835837
PMCPMC3628535
OpenAlexW2052228324

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.