Evidence map›Paper›PMID 19834027›Full record

ArticleInvestigative ophthalmology & visual science2010

Restricted localization of ponli, a novel zebrafish MAGUK-family protein, to the inner segment interface areas between green, red, and blue cones.

Jian Zou, Xiaojun Yang, Xiangyun Wei

Open access · greenAbstract read
In one paragraph

Article in Investigative ophthalmology & visual science, 2010. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 12 papers.

0numbers the graph read from it
0cells of the map it votes in
12citing papers in PubMed
0.7field-weighted citation impact, top 31% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

12 citing papers in PubMed, 16 citations in OpenAlex.

  1. Article
  2. Review
  3. Article
  4. Article
  5. A novel transgenic zebrafish line for red opsin expression in outer segments of photoreceptor cells.Developmental dynamics : an official publication of the American Association of Anatomists · 2018
    Article
  6. The Journal of neuroscience : the official journal of the Society for Neuroscience · 2017
    Article
  7. Article
  8. Spatial-temporal expressions of Crumbs and Nagie oko and their interdependence in zebrafish central nervous system during early development.International journal of developmental neuroscience : the official journal of the International Society for Developmental Neuroscience · 2013
    Article
  9. Article
  10. Structural disorganization of pronephric glomerulus in zebrafish mpp5a/nagie oko mutant.Developmental dynamics : an official publication of the American Association of Anatomists · 2012
    Article
  11. Article
  12. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

3 authors at 1 institution in 1 country.

Jian ZouDepartment of Ophthalmology, University of Pittsburgh School of Medicine, Pittsburgh, Pennsylvania 15213, USA.
Xiaojun Yang
Xiangyun Wei
University of Pittsburgh · US

Funding

Virus Production and Manipulation of Protein/Gene Expression ModuleP30EY008098 · NEI · UNIVERSITY OF PITTSBURGH AT PITTSBURGH · PI Ethan A Rossi · 1989 to 2026
$17.8M
Retinal Epithelial Polarity and Cellular Patterning:Crbs and their associatesR01EY016099 · NEI · UNIVERSITY OF PITTSBURGH AT PITTSBURGH · PI WEI, XIANGYUN · 2005 to 2012
$2.7M
NEI NIH HHS 5P30EY008098NEI NIH HHS P30 EY008098NEI NIH HHS R01 EY016099NEI NIH HHS R01EY016099
6 · The paper itself

Abstract

purposeThe inner segments (IS) of the photoreceptors in vertebrates are enriched with polarity scaffold proteins, which maintain the integrity of many tissues by mediating cell-cell adhesion either directly or indirectly. The formation of photoreceptor mosaics may require differential adhesion among different types of photoreceptors. It is unknown whether any polarity proteins are selectively expressed in certain photoreceptors to mediate differential intercellular adhesion, which may be important for photoreceptor patterning. This study was undertaken to identify such polarity proteins.

methodsTo identify novel MAGUK-family (membrane-associated guanylate kinase) proteins that are similar to Nagie oko (Nok), the authors performed BLAST searches of the zebrafish genome with the Nok amino acid sequence as the query. The coding sequence of one of the identified genes was obtained and verified through RT-PCR and RACE (rapid amplification of cDNA ends). Its protein expression patterns were examined by immunomicroscopy and Western blot analysis. Morpholino knockdown technology was used for loss-of-function analyses.

resultsThe authors cloned a novel nok homolog and designated it photoreceptor-layer-nok-like (ponli). Unlike Nok, which is expressed broadly, Ponli is only expressed at the interface areas between the IS of the green, red, and blue cones in differentiated zebrafish retina.

conclusionsPonli is the first identified polarity protein that is not expressed in all types of photoreceptors. Ponli's selective distribution stimulates future investigations on its functions for photoreceptor mosaic formation.

Indexed as

Amino Acid SequenceAnimalsBlotting, WesternCloning, MolecularGuanylate CyclaseMembrane ProteinsMicroscopy, ImmunoelectronMolecular Sequence DataNucleic Acid Amplification TechniquesRetinal Photoreceptor Cell Inner SegmentReverse Transcriptase Polymerase Chain ReactionRod OpsinsSequence Homology, Amino AcidZebrafishZebrafish ProteinsGuanylate Cyclaselong-wavelength opsinMembrane Proteinsmiddle-wavelength opsinmpp5a protein, zebrafishRod Opsinsshort-wavelength opsinZebrafish Proteins

Identifiers

PMID19834027
PMCPMC2920802
OpenAlexW2037837211

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.