Evidence map›Paper›PMID 19828605›Full record

ArticleJournal of virology2010

Role of nuclear factor Y in stress-induced activation of the herpes simplex virus type 1 ICP0 promoter.

Anna S Kushnir, David J Davido, Priscilla A Schaffer

Open access · greenAbstract read
In one paragraph

Article in Journal of virology, 2010. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 26 papers.

0numbers the graph read from it
0cells of the map it votes in
26citing papers in PubMed
0.9field-weighted citation impact, top 24% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

26 citing papers in PubMed, 31 citations in OpenAlex.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

3 authors at 3 institutions in 1 country.

Anna S KushnirDepartment of Molecular and Cellular Biology, The University of Arizona, Tucson, AZ 85712-0106, USA.
David J Davido
Priscilla A Schaffer
Beth Israel Deaconess Medical Center · USHarvard University · USUniversity of Kansas · US

Funding

VIRAL AND CELLULAR GENES IN HSV LATENCY AND REACTIVATIONP01NS035138 · NINDS · UNIVERSITY OF PENNSYLVANIA · PI KNIPE, DAVID M. · 1996 to 2010
$15.0M
IMMEDIATE-EARLY GENES OF HSVR01CA020260 · NCI · UNIVERSITY OF PENNSYLVANIA · PI BRINGHURST, RYAN M · 1985 to 2008
$3.7M
Viral and host responses to HSV infectionR01AI072357 · NIAID · UNIVERSITY OF KANSAS LAWRENCE · PI DAVIDO, DAVID J · 2007 to 2010
$1.3M
NCI NIH HHS R01 CA020260NCI NIH HHS R01CA20260NIAID NIH HHS R01 AI072357NIAID NIH HHS R01AI72357NINDS NIH HHS P01 NS035138NINDS NIH HHS P01NS35138
6 · The paper itself

Abstract

Herpesviruses are characterized by the ability to establish lifelong latent infections and to reactivate periodically, leading to recurrent disease. The herpes simplex virus type 1 (HSV-1) genome is maintained in a quiescent state in sensory neurons during latency, which is characterized by the absence of detectable viral protein synthesis. Cellular factors induced by stress may act directly on promoters within the latent viral genome to induce the transcription of viral genes and trigger reactivation. In order to identify which viral promoters are induced by stress and elucidate the cellular mechanism responsible for the induction, we generated a panel of HSV-1 promoter-luciferase constructs and measured their response to heat shock. Of the promoters tested, those of ICP0 and ICP22 were the most strongly upregulated after heat shock. Microarray analysis of lytically infected cells supported the upregulation of ICP0 and ICP22 promoters by heat shock. Mutagenic analysis of the ICP0 promoter identified two regions necessary for efficient heat-induced promoter activity, both containing predicted nuclear factor Y (NF-Y) sites, at bases -708 and -75 upstream of the transcriptional start site. While gel shift analysis confirmed NF-Y binding to both sites, only the site at -708 was important for efficient heat-induced activity. Reverse transcription-PCR analysis of selected viral transcripts in the presence of dominant-negative NF-Y confirmed the requirement for NF-Y in the induction of the ICP0 but not the ICP22 promoter by heat shock in lytically infected cells. These findings suggest that the immediate-early ICP0 gene may be among the first genes to be induced during the early events in HSV-1 reactivation, that NF-Y is important for this induction, and that other factors induce the ICP22 promoter.

Indexed as

Gene Expression Regulation, ViralPromoter Regions, GeneticAnimalsCCAAT-Binding FactorCell LineChlorocebus aethiopsGene Expression ProfilingGenes, Immediate-EarlyGenes, ViralHeat-Shock ResponseHerpesvirus 1, HumanHumansImmediate-Early ProteinsUbiquitin-Protein LigasesVero CellsVirus ActivationCCAAT-Binding FactorICP22 protein, human herpesvirus 1Immediate-Early Proteinsnuclear factor YUbiquitin-Protein LigasesVmw110 protein, Human herpesvirus 1

Identifiers

PMID19828605
PMCPMC2798407
OpenAlexW1996987329

What OpenQuestion holds

Textmetadata
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Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.