Evidence map›Paper›PMID 19828444›Full record

ArticleProceedings of the National Academy of Sciences of the United States of America2009

Stepwise formation of P-cluster in nitrogenase MoFe protein.

Chi Chung Lee, Michael A Blank, Aaron W Fay, Janice M Yoshizawa, Yilin Hu, Keith O Hodgson, Britt Hedman, Markus W Ribbe

Abstract read
In one paragraph

Article in Proceedings of the National Academy of Sciences of the United States of America, 2009. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 27 papers.

0numbers the graph read from it
0cells of the map it votes in
27citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

27 citing papers in PubMed.

  1. Review
  2. Article
  3. NifEN: a versatile player in nitrogenase assembly, catalysis and evolution.Journal of biological inorganic chemistry : JBIC : a publication of the Society of Biological Inorganic Chemistry · 2025
    Review
  4. Iron-molybdenum cofactor synthesis by a thermophilic nitrogenase devoid of the scaffold NifEN.Proceedings of the National Academy of Sciences of the United States of America · 2024
    Article
  5. Article
  6. Heterologous synthesis of the complex homometallic cores of nitrogenase P- and M-clusters inProceedings of the National Academy of Sciences of the United States of America · 2023
    Article
  7. Review
  8. Review
  9. Review
  10. Review
  11. The Spectroscopy of Nitrogenases.Chemical reviews · 2020
    Review
  12. Electron Transfer in Nitrogenase.Chemical reviews · 2020
    Review
  13. Chimeric Interaction of Nitrogenase-Like Reductases with the MoFe Protein of Nitrogenase.Chembiochem : a European journal of chemical biology · 2020
    Article
  14. Double-Cubane [8Fe9S] Clusters: A Novel Nitrogenase-Related Cofactor in Biology.Chembiochem : a European journal of chemical biology · 2020
    Review
  15. Article
  16. Article
  17. Production and isolation of vanadium nitrogenase from Azotobacter vinelandii by molybdenum depletion.Journal of biological inorganic chemistry : JBIC : a publication of the Society of Biological Inorganic Chemistry · 2017
    Article
  18. Negative cooperativity in the nitrogenase Fe protein electron delivery cycle.Proceedings of the National Academy of Sciences of the United States of America · 2016
    Article
  19. Assembly scaffold NifEN: A structural and functional homolog of the nitrogenase catalytic component.Proceedings of the National Academy of Sciences of the United States of America · 2016
    Article
  20. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

8 authors.

Chi Chung LeeDepartment of Molecular Biology and Biochemistry, University of California, Irvine, CA 92697-3900, USA.
Michael A Blank
Aaron W Fay
Janice M Yoshizawa
Yilin Hu
Keith O Hodgson
Britt Hedman
Markus W Ribbe

Funding

ZWITTERION SURFACTANT DDMAB FOR IMPROV STABIL OF PROTEINP41RR001209 · NCRR · STANFORD UNIVERSITY · PI GONZALEZ, ANA M · 1985 to 2011
$38.9M
Nitrogenase Assembly MechanismR01GM067626 · NIGMS · UNIVERSITY OF CALIFORNIA-IRVINE · PI RIBBE, MARKUS W · 2003 to 2024
$6.3M
NCRR NIH HHS P41 RR001209NCRR NIH HHS RR 001209NIGMS NIH HHS GM 67626NIGMS NIH HHS R01 GM067626
6 · The paper itself

Abstract

The P-cluster of nitrogenase is one of the most complex biological metallocenters known to date. Despite the recent advances in the chemical synthesis of P-cluster topologs, the biosynthetic mechanism of P-cluster has not been well defined. Here, we present a combined biochemical, electron paramagnetic resonance, and X-ray absorption spectroscopy/extended X-ray absorption fine-structure investigation of the maturation process of P-clusters in DeltanifH molybdenum-iron (MoFe) protein. Our data indicate that the previously identified, [Fe(4)S(4)]-like cluster pairs in DeltanifH MoFe protein are indeed the precursors to P-clusters, which can be reductively coupled into the mature [Fe(8)S(7)] structures in the presence of Fe protein, MgATP, and dithionite. Moreover, our observation of a biphasic maturation pattern of P-clusters in DeltanifH MoFe protein provides dynamic proof for the previously hypothesized, stepwise assembly mechanism of the two P-clusters in the alpha(2)beta(2)-tetrameric MoFe protein, i.e., one P-cluster is formed in one alphabeta dimer before the other in the second alphabeta dimer.

Indexed as

Azotobacter vinelandiiMetalsModels, MolecularMolybdoferredoxinMutationSpectrum AnalysisTime FactorsX-RaysMetalsMolybdoferredoxin

Identifiers

PMID19828444
PMCPMC2774011

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.