Evidence map›Paper›PMID 19828440›Full record

ArticleProceedings of the National Academy of Sciences of the United States of America2009

A feedback circuit involving let-7-family miRNAs and DAF-12 integrates environmental signals and developmental timing in Caenorhabditis elegans.

Christopher M Hammell, Xantha Karp, Victor Ambros

Abstract read
In one paragraph

Article in Proceedings of the National Academy of Sciences of the United States of America, 2009. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 85 papers.

0numbers the graph read from it
0cells of the map it votes in
85citing papers in PubMed
2.9field-weighted citation impact, top 8% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

85 citing papers in PubMed, 156 citations in OpenAlex.

  1. Article
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    Article
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  20. Biomedicines · 2021
    Review

25 more citing papers are in PubMed but not listed here.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

3 authors at 1 institution in 1 country.

Christopher M HammellProgram in Molecular Medicine, University of Massachusetts Medical School, Worcester, MA 01605, USA.
Xantha Karp
Victor Ambros
University of Massachusetts Chan Medical School · US

Funding

Developmental Regulation of MicroRNA ExpressionR01GM088365 · NIGMS · UNIV OF MASSACHUSETTS MED SCH WORCESTER · PI AMBROS, VICTOR · 2009 to 2010
$771k
Chemical Genetics of LIN-28 in C. ElegansR21CA143711 · NCI · UNIV OF MASSACHUSETTS MED SCH WORCESTER · PI AMBROS, VICTOR · 2010 to 2011
$388k
Genetics of postdauer developmental timing in C elegansF32GM073307 · NIGMS · UNIV OF MASSACHUSETTS MED SCH WORCESTER · PI KARP, XANTHA · 2005 to 2007
$143k
CHARACTERIZATION OF microRNA-BINDING PROTEINSF32GM069186 · NIGMS · DARTMOUTH COLLEGE · PI HAMMELL, CHRISTOPHER MARTIN · 2003 to 2005
$139k
BIOCHEMISTRY AND GENETICS OF LIPOAMIDE DEHYDROGENASER01GM030428 · NIGMS · UNIVERSITY OF OKLAHOMA HLTH SCIENCES CTR · PI SOKATCH, JOHN R · 1985 to 1994
–
NCI NIH HHS R21 CA143711NIGMS NIH HHS F32 GM069186NIGMS NIH HHS F32 GM073307NIGMS NIH HHS F32GM69186NIGMS NIH HHS F32 GM73307NIGMS NIH HHS GM30428NIGMS NIH HHS R01 GM088365
6 · The paper itself

Abstract

Animal development is remarkably robust; cell fates are specified with spatial and temporal precision despite physiological and environmental contingencies. Favorable conditions cause Caenorhabditis elegans to develop rapidly through four larval stages (L1-L4) to the reproductive adult. In unfavorable conditions, L2 larvae can enter the developmentally quiescent, stress-resistant dauer larva stage, enabling them to survive for prolonged periods before completing development. A specific progression of cell division and differentiation events occurs with fidelity during the larval stages, regardless of whether an animal undergoes continuous or dauer-interrupted development. The temporal patterning of developmental events is controlled by the heterochronic genes, whose products include microRNAs (miRNAs) and regulatory proteins. One of these proteins, the DAF-12 nuclear hormone receptor, modulates the transcription of certain let-7-family miRNAs, and also mediates the choice between the continuous vs. dauer-interrupted life history. Here, we report a complex feedback loop between DAF-12 and the let-7-family miRNAs involving both the repression of DAF-12 by let-7-family miRNAs and the ligand-modulated transcriptional activation and repression of the let-7-Fam miRNAs by DAF-12. We propose that this feedback loop functions to ensure robustness of cell fate decisions and to coordinate cell fate with developmental arrest.

Indexed as

EnvironmentFeedback, PhysiologicalAnimalsCaenorhabditis elegansCaenorhabditis elegans ProteinsGene Expression Regulation, DevelopmentalLigandsMicroRNAsModels, BiologicalMutationReceptors, Cytoplasmic and NuclearTime FactorsCaenorhabditis elegans ProteinsDAF-12 protein, C eleganslet-7 microRNA, C elegansLigandsMicroRNAsReceptors, Cytoplasmic and Nuclear

Identifiers

PMID19828440
PMCPMC2774035
OpenAlexW2141500037

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.