Evidence map›Paper›PMID 19826105›Full record

ArticleJournal of lipid research2010

Direct quantitative determination of ceramide glycosylation in vivo: a new approach to evaluate cellular enzyme activity of glucosylceramide synthase.

Vineet Gupta, Gauri A Patwardhan, Qian-Jin Zhang, Myles C Cabot, S Michal Jazwinski, Yong-Yu Liu

Open access · hybridAbstract readComparative StudyValidation Study
In one paragraph

Article in Journal of lipid research, 2010. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 22 papers.

0numbers the graph read from it
0cells of the map it votes in
22citing papers in PubMed
0.9field-weighted citation impact, top 27% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

22 citing papers in PubMed, 34 citations in OpenAlex.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors at 4 institutions in 1 country.

Vineet GuptaDepartment of Basic Pharmaceutical Sciences, University of Louisiana at Monroe, Monroe, LA, USA.
Gauri A Patwardhan
Qian-Jin Zhang
Myles C Cabot
S Michal Jazwinski
Yong-Yu Liu
University of Louisiana at Monroe · USLouisiana State University Health Sciences Center Shreveport · USSaint John's Health Center · USTulane University · US

Funding

VISUAL AND ANALYTICAL TOOLS FOR CLUSTER ANALYSISP20RR016456 · NCRR · LOUISIANA STATE UNIV A&M COL BATON ROUGE · PI FENG, JUNE · 2001 to 2011
$28.7M
Ceramide, Membrane Glycolipids and Glycoprotein ExpressionR01GM077391 · NIGMS · SAINT JOHN'S CANCER INSTITUTE · PI CABOT, MYLES C. · 2007 to 2010
$1.9M
NCRR NIH HHS P20 RR016456NCRR NIH HHS P20 RR16456NIGMS NIH HHS GM77391NIGMS NIH HHS R01 GM077391
6 · The paper itself

Abstract

Glucosylceramide synthase (GCS or GlcT-1), converting ceramide to glucosylceramide, is a key enzyme for the synthesis of glycosphingolipids. Due to its diverse roles in physiology and diseases, GCS may be a disease marker and drug target. Current assays for enzymes including GCS are based on reactions conducted in a test tube using enzyme preparations. Measurement of enzyme activity in laboratory-made conditions cannot directly evaluate the role of GCS in cells. Here, we introduce a new approach to determine GCS cellular activity using fluorescent NBD C6-ceramide in vivo. Cellular GCS transfers UDP-glucose to NBD C6-ceramide and produces NBD C6-glucosylceramide. C6-glucosylceramide is then separated from C6-ceramide by thin-layer chromatography and both are then quantitated by spectrophotometer. This cell-based method is able to quantitate glucosylceramide in pmol range, produced by approximately 50,000 cells or 1.0 mg tissue. This method has been used successfully to evaluate the degrees of GCS enzyme in cells and in tumors subjected to gene manipulation and chemical inhibition. These data indicate that this cell-based fluorescent method is direct, reproducible, and simple for assessing ceramide glycosylation. It is applicable to validate GCS activity in drug-resistant cancers and in other disorders.

Indexed as

4-Chloro-7-nitrobenzofurazanAnimalsCell Line, TumorCell Membrane PermeabilityCeramidesChromatography, Thin LayerColonic NeoplasmsEnzyme AssaysEnzyme InhibitorsFemaleGlucosyltransferasesGlycosylationHumansInjections, IntralesionalMiceMice, Nude4-Chloro-7-nitrobenzofurazanceramide glucosyltransferaseCeramidesEnzyme InhibitorsGlucosyltransferasesMorpholinesN-(7-(4-nitrobenzo-2-oxa-1,3-diazole))-6-aminocaproyl sphingosineOligonucleotidesRV 538

Identifiers

PMID19826105
PMCPMC2842142
OpenAlexW1974509341

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.