Evidence map›Paper›PMID 19822645›Full record

ArticleThe Journal of experimental medicine2009

Variants of CTGF are associated with hepatic fibrosis in Chinese, Sudanese, and Brazilians infected with schistosomes.

Alain Dessein, Christophe Chevillard, Violaine Arnaud, Xunya Hou, Anas Ahmed Hamdoun, Helia Dessein, Hongbin He, Suzan A Abdelmaboud, Xinsong Luo, Jun Li and 14 more

Open access · greenAbstract read
In one paragraph

Article in The Journal of experimental medicine, 2009. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 28 papers.

0numbers the graph read from it
0cells of the map it votes in
28citing papers in PubMed
2.4field-weighted citation impact, top 11% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

28 citing papers in PubMed, 58 citations in OpenAlex.

  1. Identification of Genomic Regions Implicated in Susceptibility toInternational journal of molecular sciences · 2023
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  5. Single nucleotide variants around the connective tissue growth factor (CTGF/CCN2) gene and their association with multiple sclerosis risk, disability scores, and rate of disease progression.Neurological sciences : official journal of the Italian Neurological Society and of the Italian Society of Clinical Neurophysiology · 2022
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  15. [Expression of calponin-1 and its pathogenic role in systemic sclerosis].Nan fang yi ke da xue xue bao = Journal of Southern Medical University · 2019
    Article
  16. Review
  17. Association of Polymorphisms in Connective Tissue Growth Factor and Epidermal Growth Factor Receptor Genes With Human Longevity.The journals of gerontology. Series A, Biological sciences and medical sciences · 2017
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  19. Article
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

24 authors at 6 institutions in 5 countries.

Alain DesseinInstitut National de la Santé et de la Recherche Médicale, U906, 13385 Marseille, France. alain.dessein@univmed.fr
Christophe Chevillard
Violaine Arnaud
Xunya Hou
Anas Ahmed Hamdoun
Helia Dessein
Hongbin He
Suzan A Abdelmaboud
Xinsong Luo
Jun Li
Arthur Varoquaux
Adil Mergani
Mohammed Abdelwahed
Jie Zhou
Ahmed Monis
Maira G R Pitta
Nagla Gasmelseed
Sandrine Cabantous
Yaqing Zhao
Aluizio Prata
Carlos Brandt
Nasr Eldin Elwali
Laurent Argiro
Yuesheng Li
Inserm · FRUniversity of Gezira · SDJiangsu Institute of Parasitic Diseases · CNQIMR Berghofer Medical Research Institute · AUUniversidade Federal de Pernambuco · BRUniversidade Federal do Triângulo Mineiro · BR

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Abnormal fibrosis occurs during chronic hepatic inflammations and is the principal cause of death in hepatitis C virus and schistosome infections. Hepatic fibrosis (HF) may develop either slowly or rapidly in schistosome-infected subjects. This depends, in part, on a major genetic control exerted by genes of chromosome 6q23. A gene (connective tissue growth factor [CTGF]) is located in that region that encodes a strongly fibrogenic molecule. We show that the single nucleotide polymorphism (SNP) rs9402373 that lies close to CTGF is associated with severe HF (P = 2 x 10(-6); odds ratio [OR] = 2.01; confidence interval of OR [CI] = 1.51-2.7) in two Chinese samples, in Sudanese, and in Brazilians infected with either Schistosoma japonicum or S. mansoni. Furthermore, SNP rs12526196, also located close to CTGF, is independently associated with severe fibrosis (P = 6 x 10(-4); OR = 1.94; CI = 1.32-2.82) in the Chinese and Sudanese subjects. Both variants affect nuclear factor binding and may alter gene transcription or transcript stability. The identified variants may be valuable markers for the prediction of disease progression, and identify a critical step in the development of HF that could be a target for chemotherapy.

Indexed as

Genetic Predisposition to DiseaseAgricultureAmerican Indian or Alaska NativeAnimalsAsian PeopleBlack PeopleBrazilCell LineChinaConnective Tissue Growth FactorElectrophoretic Mobility Shift AssayFisheriesHumansLiver CirrhosisNuclear ProteinsPolymorphism, Single NucleotideConnective Tissue Growth FactorNuclear Proteins

Identifiers

PMID19822645
PMCPMC2768853
OpenAlexW2109849985

What OpenQuestion holds

Textmetadata
LicenceCC BY-NC-SA
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.