Evidence map›Paper›PMID 19822228›Full record

ReviewEuropean journal of medical genetics

Genetic factors in esophageal atresia, tracheo-esophageal fistula and the VACTERL association: roles for FOXF1 and the 16q24.1 FOX transcription factor gene cluster, and review of the literature.

Charles Shaw-Smith

Open access · hybridAbstract readReview
In one paragraph

Review in European journal of medical genetics. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 41 papers.

0numbers the graph read from it
0cells of the map it votes in
41citing papers in PubMed
8.5field-weighted citation impact, top 2% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

41 citing papers in PubMed, 109 citations in OpenAlex.

  1. Article
  2. Review
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  17. Rhinocerebral zygomycosis: an unusual dramatic presentation in a paediatric cardiac patient without risk factors.European heart journal supplements : journal of the European Society of Cardiology · 2016
    Article
  18. Review
  19. Review
  20. One shall become two: Separation of the esophagus and trachea from the common foregut tube.Developmental dynamics : an official publication of the American Association of Anatomists · 2015
    Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

1 author at 1 institution in 1 country.

Charles Shaw-SmithWellcome Trust Sanger Institute, Hinxton, Cambridge, UK. css@sanger.ac.uk
Wellcome Sanger Institute · GB

Funding

Wellcome Trust
6 · The paper itself

Abstract

Esophageal atresia with/without tracheo-esophageal fistula is a relatively common malformation, occurring in around 1 in 3500 births. In around half of cases, additional malformations are present, forming either a syndrome of known genetic aetiology, or a recognised association, of which the VACTERL association (Vertebral anomalies, Anal atresia, Cardiac malformations, Tracheo-Esophageal fistula, Renal and Limb malformations) is the most recognised. Recently, microdeletions of the FOX gene cluster at 16q24.1, comprising four genes, FOXF1, MTHFSD, FOXC2 and FOXL1, were reported to cause a phenotype resembling VACTERL association, with vertebral anomalies, gastro-intestinal atresias (esophageal, duodenal and anal), congenital heart malformations, and urinary tract malformations, as well as a rare lethal developmental anomaly of the lung, alveolar capillary dysplasia. This article reviews these new data alongside other genetic causes of syndromic esophageal atresia, and also highlights information from relevant mouse models, particularly those for genes in the Sonic Hedgehog pathway.

Indexed as

Chromosomes, Human, Pair 16Abnormalities, MultipleAnimalsChromosome MappingEsophageal AtresiaForkhead Transcription FactorsHedgehog ProteinsHumansLimb Deformities, CongenitalMiceTracheoesophageal FistulaForkhead Transcription FactorsFOXF1 protein, humanHedgehog Proteins

Identifiers

PMID19822228
PMCPMC2809919
OpenAlexW2158085628

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.