Evidence map›Paper›PMID 19820409›Full record

ArticleJournal of investigative medicine : the official publication of the American Federation for Clinical Research2009

MUC7 polymorphisms are associated with a decreased risk of a diagnosis of asthma in an African American population.

Alan M Watson, Wai-Man Ngor, Heather Gordish-Dressman, Robert J Freishtat, Mary C Rose

Abstract readComparative Study
In one paragraph

Article in Journal of investigative medicine : the official publication of the American Federation for Clinical Research, 2009. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 12 papers.

0numbers the graph read from it
0cells of the map it votes in
12citing papers in PubMed
0.7field-weighted citation impact, top 27% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

12 citing papers in PubMed, 15 citations in OpenAlex.

  1. Article
  2. Article
  3. Mucins as a New Frontier in Pulmonary Fibrosis.Journal of clinical medicine · 2019
    Review
  4. Review
  5. Article
  6. Article
  7. Article
  8. Review
  9. Review
  10. Article
  11. Extracellular cyclophilin levels associate with parameters of asthma in phenotypic clusters.The Journal of asthma : official journal of the Association for the Care of Asthma · 2011
    Article
  12. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

5 authors at 2 institutions in 1 country.

Alan M WatsonResearch Center for Genetic Medicine, Children's National Medical Center (CNMC), George Washington University, Washington, DC 20010, USA.
Wai-Man Ngor
Heather Gordish-Dressman
Robert J Freishtat
Mary C Rose
Children's National · USGeorge Washington University · US

Funding

WirelessTechnology Assisted Weight Management in Pre-Diabetic Adolescents...P20MD000198 · NIMHD · HOWARD UNIVERSITY · PI CORA-BRAMBLE, DENICE ESTELLA · 2002 to 2016
$17.2M
Role of MUC5AC Mucins in Airway DiseaseR01HL033152 · NHLBI · CHILDREN'S RESEARCH INSTITUTE · PI ROSE, MARY C · 1985 to 2011
$4.2M
MENTORED PATIENT-ORIENTED RESEARCH CAREEER DEVELOPMENT AWARDK23RR020069 · NCRR · CHILDREN'S RESEARCH INSTITUTE · PI FREISHTAT, ROBERT J · 2005 to 2009
$623k
NCRR NIH HHS K23 RR020069NCRR NIH HHS K23-RR-020069NHLBI NIH HHS HL-33152NHLBI NIH HHS L40 HL074778NHLBI NIH HHS R01 HL033152NIMHD NIH HHS P20 MD000198NIMHD NIH HHS P20-MD-000198
6 · The paper itself

Abstract

purposeMucin glycoproteins contribute to lung pathophysiology in asthma. The protein backbone of mucin glycoproteins is encoded by specific MUC genes, which exhibit a high degree of polymorphisms that generate a variable number of tandem repeat (VNTR) domains. MUC7 typically encodes for 6 VNTRs, each with 23 amino acids. In a northern European cohort, a polymorphism encoding MUC7*5 (5-VNTR) is in 100% linkage disequilibrium with the single nucleotide polymorphism rs9982010 and associated with a decreased risk of being asthmatic and having better lung function. African Americans have a 5- to 10-fold increase in incidence of asthma relative to whites, who are believed to be partially associated with higher genetic susceptibility. Occurrence of the rs9982010 and MUC7 allelic frequencies was evaluated in inner-city African Americans to test their association with a diagnosis of asthma.

methodsGenomic DNA, collected from a cohort of African American asthmatic subjects, was used to detect the MUC7 VNTR polymorphisms and to analyze the rs9982010 single nucleotide polymorphism.

resultsA logistic regression analysis showed that the MUC7*5-VNTR allele decreased the likelihood of a diagnosis of asthma (odds ratio, 0.173 [95% confidence interval, 0.041-0.737]; P < 0.018) and is not in a strong linkage disequilibrium with the rs9982010 (r = 0.03; odds ratio, 66; confidence interval, 5.913-736.72). A novel MUC7*4-VNTR polymorphism, identified in an African American nonasthmatic individual, was linked to a structural rearrangement of the VNTR domain.

conclusionsThese data extend the association of MUC7*5 allelic polymorphisms and asthma to inner-city African Americans.

Indexed as

AdolescentAmino Acid SequenceAsthmaBase SequenceBlack or African AmericanChildChild, PreschoolFemaleHumansMaleMolecular Sequence DataMucinsPolymorphism, Single NucleotideRisk FactorsSalivary Proteins and PeptidesYoung AdultMUC7 protein, humanMucinsSalivary Proteins and Peptides

Identifiers

PMID19820409
PMCPMC3326394
OpenAlexW1693286608

What OpenQuestion holds

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Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.