Evidence map›Paper›PMID 19820165›Full record

ArticleProceedings of the National Academy of Sciences of the United States of America2009

VIP1 response elements mediate mitogen-activated protein kinase 3-induced stress gene expression.

Andrea Pitzschke, Armin Djamei, Markus Teige, Heribert Hirt

Open access · greenAbstract read
In one paragraph

Article in Proceedings of the National Academy of Sciences of the United States of America, 2009. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 72 papers.

0numbers the graph read from it
0cells of the map it votes in
72citing papers in PubMed
4.0field-weighted citation impact, top 5% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

72 citing papers in PubMed, 142 citations in OpenAlex.

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  12. International journal of molecular sciences · 2021
    Article
  13. MKK4/5-MPK3/6 Cascade RegulatesFrontiers in plant science · 2021
    Article
  14. Frontiers in plant science · 2021
    Article
  15. Review
  16. Article
  17. International journal of molecular sciences · 2020
    Article
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  19. Article
  20. Article

12 more citing papers are in PubMed but not listed here.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

4 authors at 2 institutions in 2 countries.

Andrea PitzschkeDepartment of Plant Molecular Biology, Max F Perutz Laboratories, University of Vienna, 1030 Vienna, Austria.
Armin Djamei
Markus Teige
Heribert Hirt
Max Perutz Labs · ATUnité de Recherche Pluridisciplinaire Prairies et Plantes Fourragères · FR

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

The plant pathogen Agrobacterium tumefaciens transforms plant cells by delivering its T-DNA into the plant cell nucleus where it integrates into the plant genome and causes tumor formation. A key role of VirE2-interacting protein 1 (VIP1) in the nuclear import of T-DNA during Agrobacterium-mediated plant transformation has been unravelled and VIP1 was shown to undergo nuclear localization upon phosphorylation by the mitogen-activated protein kinase MPK3. Here, we provide evidence that VIP1 encodes a functional bZIP transcription factor that stimulates stress-dependent gene expression by binding to VIP1 response elements (VREs), a DNA hexamer motif. VREs are overrepresented in promoters responding to activation of the MPK3 pathway such as Trxh8 and MYB44. Accordingly, plants overexpressing VIP1 accumulate high levels of Trxh8 and MYB44 transcripts, whereas stress-induced expression of these genes is impaired in mpk3 mutants. Trxh8 and MYB44 promoters are activated by VIP1 in a VRE-dependent manner. VIP1 strongly enhances expression from a synthetic promoter harboring multiple VRE copies and directly interacts with VREs in vitro and in vivo. Chromatin immunoprecipitation assays of the MYB44 promoter confirm that VIP1 binding to VREs is enhanced under conditions of MPK3 pathway stimulation. These results provide molecular insight into the cellular mechanism of target gene regulation by the MPK3 pathway.

Indexed as

Gene Expression Regulation, PlantMAP Kinase Signaling SystemResponse ElementsStress, PhysiologicalArabidopsisArabidopsis ProteinsBinding SitesChromatin ImmunoprecipitationMitogen-Activated Protein Kinase 3Protein BindingTranscription FactorsTranscription, GeneticArabidopsis ProteinsAt5g67300 protein, ArabidopsisMitogen-Activated Protein Kinase 3Transcription FactorsVIP1 protein, Arabidopsis

Identifiers

PMID19820165
PMCPMC2759709
OpenAlexW2120033506

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.