Evidence map›Paper›PMID 19820119›Full record

ArticleEukaryotic cell2009

Regulatory diversity of TUP1 in Cryptococcus neoformans.

Hyeseung Lee, Yun C Chang, Ashok Varma, Kyung J Kwon-Chung

Open access · diamondAbstract read
In one paragraph

Article in Eukaryotic cell, 2009. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 27 papers.

0numbers the graph read from it
0cells of the map it votes in
27citing papers in PubMed
3.0field-weighted citation impact, top 9% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

27 citing papers in PubMed, 49 citations in OpenAlex.

  1. Resistance gene mutations and phylogenetic relationships inFrontiers in cellular and infection microbiology · 2026
    Article
  2. The "Little Iron Waltz": The Ternary Response ofJournal of fungi (Basel, Switzerland) · 2020
    Review
  3. Article
  4. Review
  5. Review
  6. Review
  7. Physiological Differences in Cryptococcus neoformans StrainsAntimicrobial agents and chemotherapy · 2017
    Review
  8. Comparative Ecology of CapsularFrontiers in microbiology · 2017
    Article
  9. Article
  10. Article
  11. Article
  12. Article
  13. Functional profiling of human fungal pathogen genomes.Cold Spring Harbor perspectives in medicine · 2014
    Review
  14. Article
  15. Article
  16. Article
  17. Article
  18. Review
  19. Quorum sensing in fungi--a review.Medical mycology · 2012
    Review
  20. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

4 authors at 1 institution in 1 country.

Hyeseung LeeMolecular Microbiology Section, Laboratory of Clinical Infectious Diseases, National Institute of Allergy and Infectious Diseases/NIH, Bethesda, MD 20892, USA.
Yun C Chang
Ashok Varma
Kyung J Kwon-Chung
National Institute of Allergy and Infectious Diseases · US

Funding

Intramural NIH HHS
6 · The paper itself

Abstract

Cryptococcus neoformans serotype A strains, the major cause of cryptococcosis, are distributed worldwide, while serotype D strains are more concentrated in Central Europe. We have previously shown that deletion of the global regulator TUP1 in serotype D isolates results in a novel peptide-mediated, density-dependent growth phenotype that mimics quorum sensing and is not known to exist in other fungi. Unlike for tup1Delta strains of serotype D, the density-dependent growth phenotype was found to be absent in tup1Delta strains of serotype A which had been derived from several different genetic clusters. The serotype A H99 tup1Delta strain showed less retardation in the growth rate than tup1Delta strains of serotype D, but the mating efficiency was found to be similar in both serotypes. Deletion of TUP1 in the H99 strain resulted in significantly enhanced capsule production and defective melanin formation and also revealed a unique regulatory role of the TUP1 gene in maintaining iron/copper homeostasis. Differential expression of various genes involved in capsule formation and iron/copper homeostasis was observed between the wild-type and tup1Delta H99 strains. Furthermore, the H99 tup1Delta strain displayed pleiotropic effects which included sensitivity to sodium dodecyl sulfate, susceptibility to fluconazole, and attenuated virulence. These results demonstrate that the global regulator TUP1 has pathobiological significance and plays both conserved and distinct roles in serotype A and D strains of C. neoformans.

Indexed as

Cell WallCopperCryptococcus neoformansFluconazoleFungal ProteinsGene DeletionGene Expression Regulation, FungalGenes, Mating Type, FungalHomeostasisIronMicrobial Sensitivity TestsMutationPhenotypeQuorum SensingSerotypingVirulenceCopperFluconazoleFungal ProteinsIron

Identifiers

PMID19820119
PMCPMC2794222
OpenAlexW2105711192

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.