Evidence map›Paper›PMID 19816407›Full record

ArticleThe EMBO journal2009

Synapse formation regulated by protein tyrosine phosphatase receptor T through interaction with cell adhesion molecules and Fyn.

So-Hee Lim, Seok-Kyu Kwon, Myung Kyu Lee, Jeonghee Moon, Dae Gwin Jeong, Eunha Park, Seung Jun Kim, Byung Chul Park, Sang Chul Lee, Seong-Eon Ryu and 5 more

Open access · greenAbstract read
In one paragraph

Article in The EMBO journal, 2009. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 44 papers, 1 of them a synthesis that pooled it.

0numbers the graph read from it
0cells of the map it votes in
44citing papers in PubMed, 1 pooled it
2.0field-weighted citation impact, top 14% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

44 citing papers in PubMed, 1 synthesis or guideline pooled it, 86 citations in OpenAlex.

  1. Pooled it
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

15 authors at 3 institutions in 1 country.

So-Hee LimBrain Research Center, Korea Research Institute of Bioscience and Biotechnology, Daejeon, Republic of Korea.
Seok-Kyu Kwon
Myung Kyu Lee
Jeonghee Moon
Dae Gwin Jeong
Eunha Park
Seung Jun Kim
Byung Chul Park
Sang Chul Lee
Seong-Eon Ryu
Dae-Yeul Yu
Bong Hyun Chung
Eunjoon Kim
Pyung-Keun Myung
Jae-Ran Lee
Korea Research Institute of Bioscience and Biotechnology · KRKorea Advanced Institute of Science and Technology · KRChungnam National University · KR

Funding

PHS HHS R01-2007-000-11499-0
6 · The paper itself

Abstract

The receptor-type protein tyrosine phosphatases (RPTPs) have been linked to signal transduction, cell adhesion, and neurite extension. PTPRT/RPTPrho is exclusively expressed in the central nervous system and regulates synapse formation by interacting with cell adhesion molecules and Fyn protein tyrosine kinase. Overexpression of PTPRT in cultured neurons increased the number of excitatory and inhibitory synapses by recruiting neuroligins that interact with PTPRT through their ecto-domains. In contrast, knockdown of PTPRT inhibited synapse formation and withered dendrites. Incubation of cultured neurons with recombinant proteins containing the extracellular region of PTPRT reduced the number of synapses by inhibiting the interaction between ecto-domains. Synapse formation by PTPRT was inhibited by phosphorylation of tyrosine 912 within the membrane-proximal catalytic domain of PTPRT by Fyn. This tyrosine phosphorylation reduced phosphatase activity of PTPRT and reinforced homophilic interactions of PTPRT, thereby preventing the heterophilic interaction between PTPRT and neuroligins. These results suggest that brain-specific PTPRT regulates synapse formation through interaction with cell adhesion molecules, and this function and the phosphatase activity are attenuated through tyrosine phosphorylation by the synaptic tyrosine kinase Fyn.

Indexed as

AnimalsBrainCell Adhesion MoleculesCells, CulturedGuinea PigsHumansMiceModels, BiologicalNeuronsPhosphorylationProtein BindingProto-Oncogene Proteins c-fynRatsReceptor-Like Protein Tyrosine Phosphatases, Class 2RNA, Small InterferingSynapsesCell Adhesion MoleculesFYN protein, humanProto-Oncogene Proteins c-fynPTPRT protein, humanReceptor-Like Protein Tyrosine Phosphatases, Class 2RNA, Small Interfering

Identifiers

PMID19816407
PMCPMC2782100
OpenAlexW2102827430

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.