Evidence map›Paper›PMID 19815561›Full record

ArticleThe Journal of biological chemistry2010

Crystal structures of progressive Ca2+ binding states of the Ca2+ sensor Ca2+ binding domain 1 (CBD1) from the CALX Na+/Ca2+ exchanger reveal incremental conformational transitions.

Mousheng Wu, Hoa Dinh Le, Meitian Wang, Vladimir Yurkov, Alexander Omelchenko, Mark Hnatowich, Jay Nix, Larry V Hryshko, Lei Zheng

Open access · hybridAbstract read
In one paragraph

Article in The Journal of biological chemistry, 2010. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 18 papers.

0numbers the graph read from it
0cells of the map it votes in
18citing papers in PubMed
7.2field-weighted citation impact, top 3% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

18 citing papers in PubMed, 40 citations in OpenAlex.

  1. Article
  2. Review
  3. CALX-CBD1 CaBiophysical journal · 2020
    Article
  4. Modulation of the cardiac NaCell calcium · 2020
    Review
  5. Article
  6. Molecular determinants of pH regulation in the cardiac NaThe Journal of general physiology · 2018
    Article
  7. The Role of Sodium in Diabetic Cardiomyopathy.Frontiers in physiology · 2018
    Review
  8. TheFrontiers in cellular neuroscience · 2018
    Article
  9. Review
  10. Na+/Ca2+ exchange and Na+/K+-ATPase in the heart.The Journal of physiology · 2015
    Review
  11. Article
  12. The very large G protein coupled receptor (Vlgr1) in hair cells.Journal of molecular neuroscience : MN · 2013
    Review
  13. Ca2+ regulation of ion transport in the Na+/Ca2+ exchanger.The Journal of biological chemistry · 2012
    Review
  14. Article
  15. Article
  16. Article
  17. Ca2+-dependent structural rearrangements within Na+-Ca2+ exchanger dimers.Proceedings of the National Academy of Sciences of the United States of America · 2011
    Article
  18. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

9 authors at 4 institutions in 3 countries.

Mousheng WuCenter for Membrane Biology, Department of Biochemistry and Molecular Biology, University of Texas Medical School at Houston, Houston, Texas 77030, USA.
Hoa Dinh Le
Meitian Wang
Vladimir Yurkov
Alexander Omelchenko
Mark Hnatowich
Jay Nix
Larry V Hryshko
Lei Zheng
St. Boniface Hospital · CAUniversity of Manitoba · CALawrence Berkeley National Laboratory · USPaul Scherrer Institute · CH

Funding

Canadian Institutes of Health Research
6 · The paper itself

Abstract

Na(+)/Ca(2+) exchangers (NCX) constitute a major Ca(2+) export system that facilitates the re-establishment of cytosolic Ca(2+) levels in many tissues. Ca(2+) interactions at its Ca(2+) binding domains (CBD1 and CBD2) are essential for the allosteric regulation of Na(+)/Ca(2+) exchange activity. The structure of the Ca(2+)-bound form of CBD1, the primary Ca(2+) sensor from canine NCX1, but not the Ca(2+)-free form, has been reported, although the molecular mechanism of Ca(2+) regulation remains unclear. Here, we report crystal structures for three distinct Ca(2+) binding states of CBD1 from CALX, a Na(+)/Ca(2+) exchanger found in Drosophila sensory neurons. The fully Ca(2+)-bound CALX-CBD1 structure shows that four Ca(2+) atoms bind at identical Ca(2+) binding sites as those found in NCX1 and that the partial Ca(2+) occupancy and apoform structures exhibit progressive conformational transitions, indicating incremental regulation of CALX exchange by successive Ca(2+) binding at CBD1. The structures also predict that the primary Ca(2+) pair plays the main role in triggering functional conformational changes. Confirming this prediction, mutagenesis of Glu(455), which coordinates the primary Ca(2+) pair, produces dramatic reductions of the regulatory Ca(2+) affinity for exchange current, whereas mutagenesis of Glu(520), which coordinates the secondary Ca(2+) pair, has much smaller effects. Furthermore, our structures indicate that Ca(2+) binding only enhances the stability of the Ca(2+) binding site of CBD1 near the hinge region while the overall structure of CBD1 remains largely unaffected, implying that the Ca(2+) regulatory function of CBD1, and possibly that for the entire NCX family, is mediated through domain interactions between CBD1 and the adjacent CBD2 at this hinge.

Indexed as

AnimalsAntiportersBinding SitesCalciumCrystallographyDrosophilaDrosophila ProteinsMembrane ProteinsMutagenesis, Site-DirectedPatch-Clamp TechniquesProtein Interaction Domains and MotifsProtein Structure, SecondaryProtein Structure, TertiarySensory Receptor CellsSodiumAntiportersCalciumCalx protein, DrosophilaDrosophila ProteinsMembrane ProteinsSodium

Identifiers

PMID19815561
PMCPMC2807312
OpenAlexW2058182298

What OpenQuestion holds

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.