Evidence map›Paper›PMID 19815513›Full record

ArticleProceedings of the National Academy of Sciences of the United States of America2009

Peroxisome dependency of alkyl-containing GPI-anchor biosynthesis in the endoplasmic reticulum.

Noriyuki Kanzawa, Yusuke Maeda, Hideo Ogiso, Yoshiko Murakami, Ryo Taguchi, Taroh Kinoshita

Open access · greenAbstract read
In one paragraph

Article in Proceedings of the National Academy of Sciences of the United States of America, 2009. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 26 papers.

0numbers the graph read from it
0cells of the map it votes in
26citing papers in PubMed
2.0field-weighted citation impact, top 13% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

26 citing papers in PubMed, 52 citations in OpenAlex.

  1. Article
  2. Review
  3. Article
  4. Review
  5. Article
  6. Ether lipids and a peroxisomal riddle in sperm.Frontiers in cell and developmental biology · 2023
    Review
  7. Article
  8. Review
  9. Review
  10. Targeting lipid droplet lysophosphatidylcholine for cisplatin chemotherapy.Journal of cellular and molecular medicine · 2020
    Article
  11. Review
  12. Review
  13. Article
  14. Review
  15. Review
  16. Article
  17. Article
  18. The ether lipid precursor hexadecylglycerol protects against Shiga toxins.Cellular and molecular life sciences : CMLS · 2014
    Article
  19. Article
  20. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors at 3 institutions in 2 countries.

Noriyuki KanzawaResearch Institute for Microbial Diseases, Osaka University, Suita-city, Osaka 565-0871, Japan.
Yusuke Maeda
Hideo Ogiso
Yoshiko Murakami
Ryo Taguchi
Taroh Kinoshita
Microbial Chemistry Research Foundation · JPJapan Science and Technology Agency · JPThe University of Tokyo · JP

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Glycosylphosphatidylinositol-anchored proteins (GPI-APs) play various roles in cell-cell and cell-environment interactions. GPI is synthesized in the endoplasmic reticulum (ER) from phosphatidylinositol (PI) through step-wise reactions including transfers of monosaccharides and preassembled GPI is transferred en bloc to proteins. Cellular PI contains mostly diacyl glycerol and unsaturated fatty acid in the sn-2 position, whereas mammalian GPI-APs have mainly 1-alkyl-2-acyl PI and almost exclusively stearic acid, a saturated chain, at the sn-2 position. The latter characteristic is the result of fatty acid remodeling occurring in the Golgi, generating GPI-anchors compatible with raft membrane. The former characteristic is the result of diacyl to alkyl-acyl change occurring in the third GPI intermediate, glucosaminyl-inositolacylated-PI (GlcN-acyl-PI). Here we investigated the origin of the sn-1 alkyl-chain in GPI-APs. Using cell lines defective in the peroxisomal alkyl-phospholipid biosynthetic pathway, we demonstrated that generation of alkyl-containing GPI is dependent upon the peroxisomal pathway. We further demonstrated that in cells defective in the peroxisome pathway, the chain composition of the diacyl glycerol moiety in GlcN-acyl-PI is different from those in the first intermediate N-acetylglucosaminyl-PI and cellular PI, indicating that not only diacyl to alkyl-acyl change but also diacyl to diacyl change occurs in GlcN-acyl-PI. We therefore propose a biosynthetic step within GlcN-acyl-PI in which the diacyl glycerol (or diacyl phosphatidic acid) part is replaced by diradyl glycerol (or diradyl phosphatidic acid). These results highlight cooperation of three organelles, the ER, the Golgi, and the peroxisome, in the generation of the lipid portion of GPI-APs.

Indexed as

AcyltransferasesAlkyl and Aryl TransferasesAnimalsCHO CellsCricetinaeCricetulusEndoplasmic ReticulumFatty AcidsGenetic Complementation TestGlycosylphosphatidylinositolsGolgi ApparatusHumansMembrane ProteinsModels, BiologicalMutationPeroxisomesAcyltransferasesAlkyl and Aryl Transferasesalkylglycerone-phosphate synthaseFatty Acidsglycerone-phosphate O-acyltransferaseGlycosylphosphatidylinositolsMembrane ProteinsRecombinant Proteins

Identifiers

PMID19815513
PMCPMC2764918
OpenAlexW2128103227

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.