Evidence map›Paper›PMID 19812255›Full record

ArticleMolecular biology of the cell2009

Utp9p facilitates Msn5p-mediated nuclear reexport of retrograded tRNAs in Saccharomyces cerevisiae.

Manoja B K Eswara, Andrew T McGuire, Jacqueline B Pierce, Dev Mangroo

Erratum issuedOpen access · greenAbstract read
In one paragraph

Article in Molecular biology of the cell, 2009. The graph could read no effect estimate from its abstract, so it casts no vote on the map. An erratum has been issued. Cited by 20 papers.

0numbers the graph read from it
0cells of the map it votes in
20citing papers in PubMed
2.3field-weighted citation impact, top 12% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

20 citing papers in PubMed, 38 citations in OpenAlex.

  1. Article
  2. Gle1 is required for tRNA to stimulate Dbp5 ATPase activitybioRxiv : the preprint server for biology · 2023
    Article
  3. Article
  4. Article
  5. Article
  6. Nup100 regulatesRNA (New York, N.Y.) · 2017
    Article
  7. Article
  8. Review
  9. Article
  10. Article
  11. Review
  12. Article
  13. Article
  14. Article
  15. Article
  16. Article
  17. tRNA biology charges to the front.Genes & development · 2010
    Review
  18. Article
  19. Review
  20. Transfer RNA travels from the cytoplasm to organelles.Wiley interdisciplinary reviews. RNA
    Review
4 · The record

Corrections and comments

  • Erratum issued
5 · Who and what money

Authors and funding

4 authors at 1 institution in 1 country.

Manoja B K EswaraDepartment of Molecular and Cellular Biology, University of Guelph, Guelph, ON, N1G 2W1, Canada.
Andrew T McGuire
Jacqueline B Pierce
Dev Mangroo
University of Guelph · CA

Funding

Canadian Institutes of Health Research
6 · The paper itself

Abstract

Utp9p is a nucleolar protein that is part of a subcomplex containing several U3 snoRNA-associated proteins including Utp8p, which is a protein that shuttles aminoacyl-tRNAs from the nucleolus to the nuclear tRNA export receptors Los1p and Msn5p in Saccharomyces cerevisiae. Here we show that Utp9p is also an intranuclear component of the Msn5p-mediated nuclear tRNA export pathway. Depletion of Utp9p caused nuclear accumulation of mature tRNAs derived from intron-containing precursors, but not tRNAs made from intronless pre-tRNAs. Utp9p binds tRNA directly and saturably, and copurifies with Utp8p, Gsp1p, and Msn5p, but not with Los1p or aminoacyl-tRNA synthetases. Utp9p interacts directly with Utp8p, Gsp1p, and Msn5p in vitro. Furthermore, Gsp1p forms a complex with Msn5p and Utp9p in a tRNA-dependent manner. However, Utp9p does not shuttle between the nucleus and the cytoplasm. Because tRNA splicing occurs in the cytoplasm and the spliced tRNAs are retrograded back to the nucleus, we propose that Utp9p facilitates nuclear reexport of retrograded tRNAs. Moreover, the data suggest that Utp9p together with Utp8p translocate aminoacyl-tRNAs from the nucleolus to Msn5p and assist with formation of the Msn5p-tRNA-Gsp1p-GTP export complex.

Indexed as

Saccharomyces cerevisiaeActive Transport, Cell NucleusAmino Acyl-tRNA SynthetasesAnimalsCell NucleusIn Situ Hybridization, FluorescenceIntronsKaryopherinsMonomeric GTP-Binding ProteinsMultiprotein ComplexesNuclear Pore Complex ProteinsNuclear ProteinsProtein IsoformsRecombinant Fusion ProteinsRNA-Binding ProteinsRNA, TransferAmino Acyl-tRNA SynthetasesGSP1 protein, S cerevisiaeKaryopherinsLos1 protein, S cerevisiaeMonomeric GTP-Binding ProteinsMSN5 protein, S cerevisiaeMultiprotein ComplexesNuclear Pore Complex ProteinsNuclear ProteinsProtein IsoformsRecombinant Fusion ProteinsRNA-Binding ProteinsRNA, TransferSaccharomyces cerevisiae ProteinsUtp8 protein, S cerevisiaeUtp9 protein, S cerevisiae

Identifiers

PMID19812255
PMCPMC2785743
OpenAlexW2096365852

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.