Evidence map›Paper›PMID 19808965›Full record

ArticleCancer research2009

A modified sleeping beauty transposon system that can be used to model a wide variety of human cancers in mice.

Adam J Dupuy, Laura M Rogers, Jinsil Kim, Kishore Nannapaneni, Timothy K Starr, Pentao Liu, David A Largaespada, Todd E Scheetz, Nancy A Jenkins, Neal G Copeland

Open access · bronzeAbstract read
In one paragraph

Article in Cancer research, 2009. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 113 papers.

0numbers the graph read from it
0cells of the map it votes in
113citing papers in PubMed
5.5field-weighted citation impact, top 3% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

113 citing papers in PubMed, 168 citations in OpenAlex.

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  16. Evaluating the state of the science for adeno-associated virus integration: An integrated perspective.Molecular therapy : the journal of the American Society of Gene Therapy · 2022
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53 more citing papers are in PubMed but not listed here.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

10 authors at 5 institutions in 4 countries.

Adam J DupuyDepartment of Anatomy and Cell Biology, Center for Bioinformatics, Computational Biology and Biomedical Engineering, Roy J and Lucille A Carver College of Medicine, University of Iowa, Iowa City, Iowa 52242, USA. adam-dupuy@uiowa.edu
Laura M Rogers
Jinsil Kim
Kishore Nannapaneni
Timothy K Starr
Pentao Liu
David A Largaespada
Todd E Scheetz
Nancy A Jenkins
Neal G Copeland
Institute of Cell Biology and Neurobiology · ITInstitute of Molecular and Cell Biology · SGUniversity of Minnesota · USUniversity of Iowa · USWellcome Sanger Institute · GB

Funding

Sleeping Beauty for uncovering cancer genes in miceR01CA113636 · NCI · UNIVERSITY OF MINNESOTA · PI LARGAESPADA, DAVID ANDREW · 2006 to 2016
$2.5M
NCI NIH HHS R01 CA113636
6 · The paper itself

Abstract

Recent advances in cancer therapeutics stress the need for a better understanding of the molecular mechanisms driving tumor formation. This can be accomplished by obtaining a more complete description of the genes that contribute to cancer. We previously described an approach using the Sleeping Beauty (SB) transposon system to model hematopoietic malignancies in mice. Here, we describe modifications of the SB system that provide additional flexibility in generating mouse models of cancer. First, we describe a Cre-inducible SBase allele, RosaSBase(LsL), that allows the restriction of transposon mutagenesis to a specific tissue of interest. This allele was used to generate a model of germinal center B-cell lymphoma by activating SBase expression with an Aid-Cre allele. In a second approach, a novel transposon was generated, T2/Onc3, in which the CMV enhancer/chicken beta-actin promoter drives oncogene expression. When combined with ubiquitous SBase expression, the T2/Onc3 transposon produced nearly 200 independent tumors of more than 20 different types in a cohort of 62 mice. Analysis of transposon insertion sites identified novel candidate genes, including Zmiz1 and Rian, involved in squamous cell carcinoma and hepatocellular carcinoma, respectively. These novel alleles provide additional tools for the SB system and provide some insight into how this mutagenesis system can be manipulated to model cancer in mice.

Indexed as

Disease Models, AnimalAnimalsCarcinoma, HepatocellularDNA Transposable ElementsFemaleGreen Fluorescent ProteinsHumansImmunoenzyme TechniquesIntegrasesIntracellular Signaling Peptides and ProteinsLiver Neoplasms, ExperimentalLymphoma, B-CellMaleMiceMice, Inbred C3HMice, Inbred C57BLCre recombinaseDNA Transposable Elementsenhanced green fluorescent proteinGreen Fluorescent ProteinsIntegrasesIntracellular Signaling Peptides and ProteinsNuclear ProteinsRian protein, mouseRNA-Binding ProteinsRNA, MessengerZimp10 protein, mouse

Identifiers

PMID19808965
PMCPMC3700628
OpenAlexW2169365861

What OpenQuestion holds

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Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.