Evidence map›Paper›PMID 19808670›Full record

ArticleThe Journal of biological chemistry2009

A promiscuous conformational switch in the secondary multidrug transporter MdfA.

Nir Fluman, Devora Cohen-Karni, Tali Weiss, Eitan Bibi

Abstract read
In one paragraph

Article in The Journal of biological chemistry, 2009. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 12 papers.

0numbers the graph read from it
0cells of the map it votes in
12citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

12 citing papers in PubMed.

  1. Article
  2. Article
  3. Article
  4. Article
  5. Article
  6. Article
  7. The multidrug-resistance transporter MdfA from Escherichia coli: crystallization and X-ray diffraction analysis.Acta crystallographica. Section F, Structural biology communications · 2017
    Article
  8. Article
  9. Review
  10. Article
  11. Manipulating the drug/proton antiport stoichiometry of the secondary multidrug transporter MdfA.Proceedings of the National Academy of Sciences of the United States of America · 2012
    Article
  12. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

4 authors.

Nir FlumanDepartment of Biological Chemistry, Weizmann Institute of Science, Rehovot 76100, Israel.
Devora Cohen-Karni
Tali Weiss
Eitan Bibi

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Multidrug (Mdr) transporters are membrane proteins that actively export structurally dissimilar drugs from the cell, thereby rendering the cell resistant to toxic compounds. Similar to substrate-specific transporters, Mdr transporters also undergo substrate-induced conformational changes. However, the mechanism by which a variety of dissimilar substrates are able to induce similar transport-compatible conformational responses in a single transporter remains unclear. To address this major aspect of Mdr transport, we studied the conformational behavior of the Escherichia coli Mdr transporter MdfA. Our results show that indeed, different substrates induce similar conformational changes in the transporter. Intriguingly, in addition, we observed that compounds other than substrates are able to confer similar conformational changes when covalently attached at the putative Mdr recognition pocket of MdfA. Taken together, the results suggest that the Mdr-binding pocket of MdfA is conformationally sensitive. We speculate that the same conformational switch that usually drives active transport is triggered promiscuously by merely occupying the Mdr-binding site.

Indexed as

Binding SitesBiological TransportCell MembraneDetergentsDrug Resistance, Multiple, BacterialEndopeptidase KEscherichia coliEscherichia coli ProteinsMaleimidesMembrane Transport ProteinsModels, ChemicalMolecular ConformationPolyethylene GlycolsProtein ConformationSubstrate SpecificityDetergentsEndopeptidase KEscherichia coli ProteinsmaleimideMaleimidesMdfa protein, E coliMembrane Transport ProteinsPolyethylene Glycols

Identifiers

PMID19808670
PMCPMC2781643

What OpenQuestion holds

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.