ArticleGenetics2009
Comparison of mating designs for establishing nested association mapping populations in maize and Arabidopsis thaliana.
Article in Genetics, 2009. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 24 papers.
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Who cites it
24 citing papers in PubMed.
- The potential of considering photosynthesis parameters in crop yield breeding by genomic prediction.Journal of experimental botany · 2026Article
- Nested association mapping in oat (Avena sativa L.) identifies the location of multiple genes conferring resistance to the crown rust pathogen Puccinia coronata f. sp. avenae.TAG. Theoretical and applied genetics. Theoretische und angewandte Genetik · 2025Article
- Assessment of genomic prediction capabilities of transcriptome data in a barley multi-parent RIL population.TAG. Theoretical and applied genetics. Theoretische und angewandte Genetik · 2025Article
- Genetic mapping reveals new loci and alleles for flowering time and plant height using the double round-robin population of barley.Journal of experimental botany · 2024Article
- Affordable, accurate and unbiased RNA sequencing by manual library miniaturization: A case study in barley.Plant biotechnology journal · 2023Article
- The double round-robin population unravels the genetic architecture of grain size in barley.Journal of experimental botany · 2022Article
- Accurate recombination estimation from pooled genotyping and sequencing: a case study on barley.BMC genomics · 2022Article
- Article
- Genomic prediction of the recombination rate variation in barley - A route to highly recombinogenic genotypes.Plant biotechnology journal · 2022Article
- Genetic characterization of a Sorghum bicolor multiparent mapping population emphasizing carbon-partitioning dynamics.G3 (Bethesda, Md.) · 2021Article
- Exploration of the Yield Potential of Mesoamerican Wild Common Beans From Contrasting Eco-Geographic Regions by Nested Recombinant Inbred Populations.Frontiers in plant science · 2020Article
- Transcriptomic and presence/absence variation in the barley genome assessed from multi-tissue mRNA sequencing and their power to predict phenotypic traits.BMC genomics · 2019Article
- Article
- A Major Root Architecture QTL Responding to Water Limitation in Durum Wheat.Frontiers in plant science · 2019Article
- Increased Power To Dissect Adaptive Traits in Global Sorghum Diversity Using a Nested Association Mapping Population.Genetics · 2017Article
- Comparison of statistical models for nested association mapping in rapeseed (Brassica napus L.) through computer simulations.BMC plant biology · 2016Article
- MAGIC populations in crops: current status and future prospects.TAG. Theoretical and applied genetics. Theoretische und angewandte Genetik · 2015Review
- Linkage mapping of Barley yellow dwarf virus resistance in connected populations of maize.BMC plant biology · 2015Article
- A first step toward the development of a barley NAM population and its utilization to detect QTLs conferring leaf rust seedling resistance.TAG. Theoretical and applied genetics. Theoretische und angewandte Genetik · 2014Article
- Entering the second century of maize quantitative genetics.Heredity · 2014Review
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1 author.
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Abstract
The nested association mapping (NAM) strategy promises to combine the advantages of linkage mapping and association mapping. The objectives of my research were to (i) investigate by computer simulations the power and type I error rate for detecting quantitative trait loci (QTL) with additive effects using recombinant inbred line (RIL) populations of maize derived from various mating designs, (ii) compare these estimates to those obtained for RIL populations of Arabidopsis thaliana, (iii) examine for both species the optimum number of inbreds used as parents of the NAM populations, and (iv) provide on the basis of the results of these two model species a general guideline for the design of NAM populations in other plant species. The computer simulations were based on empirical data of a set of 26 diverse maize inbred lines and a set of 20 A. thaliana inbreds both representing a large part of the genetic diversity of the corresponding species. I observed considerable differences in the power for QTL detection between NAM populations of the same size but created on the basis of different crossing schemes. This finding illustrated the potential to improve the power for QTL detection without increasing the total resources necessary for a QTL mapping experiment. Furthermore, my results clearly indicated that it is advantageous to create NAM populations from a large number of parental inbreds.
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