Evidence map›Paper›PMID 19805123›Full record

ArticleProceedings of the National Academy of Sciences of the United States of America2009

NF-kappaB activity is constitutively elevated in c-Abl null fibroblasts.

Rachel A Liberatore, Stephen P Goff, Irene Nunes

Open access · bronzeAbstract read
In one paragraph

Article in Proceedings of the National Academy of Sciences of the United States of America, 2009. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 8 papers.

0numbers the graph read from it
0cells of the map it votes in
8citing papers in PubMed
0.7field-weighted citation impact, top 26% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

8 citing papers in PubMed, 15 citations in OpenAlex.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

3 authors at 1 institution in 1 country.

Rachel A LiberatoreDepartment of Biochemistry and Molecular Biophysics, College of Physicians and Surgeons, Columbia University, New York, NY 10032, USA.
Stephen P Goff
Irene Nunes
Columbia University · US

Funding

New investigatior: Positional Cloning the Aphakia GeneR01EY013424 · NEI · COLUMBIA UNIVERSITY HEALTH SCIENCES · PI NUNES, IRENE O · 2002 to 2004
$1.2M
Howard Hughes Medical InstituteNEI NIH HHS R01 EY013424
6 · The paper itself

Abstract

The c-abl proto-oncogene encodes a nonreceptor tyrosine kinase involved in many cellular processes, including signaling from growth factor and antigen receptors, remodeling the cytoskeleton, and responding to DNA damage and oxidative stress. Many downstream pathways are affected by c-Abl. Elevated c-Abl kinase activity can inhibit NF-kappaB activity by stabilizing the inhibitory protein IkappaB alpha, raising the possibility that c-Abl-deficient cells might have increased NF-kappaB activity. We examined the levels of NF-kappaB activity in primary mouse embryonic fibroblasts (MEFs) derived from wild-type and c-Abl knockout mice and found that the knockout MEFs indeed exhibited elevated NF-kappaB activity in response to stimulation as well as constitutively elevated NF-kappaB activity. Thus, endogenous c-Abl is a negative regulator of basal and inducible NF-kappaB activity. Examination of various points of NF-kappaB regulation revealed that unstimulated c-Abl knockout MEFs do not exhibit an increase in IkappaB alpha degradation, p65/RelA nuclear translocation, or DNA binding of NF-kappaB subunits. They do, however, show reduced levels of the histone deacetylase HDAC1, a negative regulator of basal NF-kappaB activity. Unstimulated c-Abl knockout MEFs are less responsive to induction of NF-kappaB activity by trichostatin A, an HDAC inhibitor, suggesting that c-Abl might play a role in the HDAC-mediated repression of basal NF-kappaB activity.

Indexed as

Active Transport, Cell NucleusAnimalsApoptosisCells, CulturedDNAEnzyme InhibitorsFibroblastsGenes, ablHistone Deacetylase InhibitorsHydrogen PeroxideHydroxamic AcidsI-kappa B ProteinsInterleukin-1betaMiceMice, Inbred C57BLMice, KnockoutDNAEnzyme InhibitorsHistone Deacetylase InhibitorsHydrogen PeroxideHydroxamic AcidsI-kappa B ProteinsInterleukin-1betaNF-kappa BNF-KappaB Inhibitor alphaNfkbia protein, mouseProto-Oncogene Proteins c-ablRela protein, mouseTranscription Factor RelAtrichostatin ATumor Necrosis Factor-alpha

Identifiers

PMID19805123
PMCPMC2754925
OpenAlexW2034587145

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.