Evidence map›Paper›PMID 19805071›Full record

ArticleProceedings of the National Academy of Sciences of the United States of America2009

Groucho corepressor functions as a cofactor for the Knirps short-range transcriptional repressor.

Sandhya Payankaulam, David N Arnosti

Abstract read
In one paragraph

Article in Proceedings of the National Academy of Sciences of the United States of America, 2009. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 12 papers.

0numbers the graph read from it
0cells of the map it votes in
12citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

12 citing papers in PubMed.

  1. Article
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  5. Review
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  10. Review
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

2 authors.

Sandhya PayankaulamDepartment of Biochemistry and Molecular Biology, Michigan State University, East Lansing, MI 48824, USA.
David N Arnosti

Funding

MOLECULAR ANALYSIS OF TRANSCRIPTIONAL REPRESSIONR01GM056976 · NIGMS · MICHIGAN STATE UNIVERSITY · PI ARNOSTI, DAVID N · 1998 to 2014
$4.7M
NIGMS NIH HHS GM-56976NIGMS NIH HHS R01 GM056976
6 · The paper itself

Abstract

Despite the pervasive roles for repressors in transcriptional control, the range of action of these proteins on cis regulatory elements remains poorly understood. Knirps has essential roles in patterning the Drosophila embryo by means of short-range repression, an activity that is essential for proper regulation of complex transcriptional control elements. Short-range repressors function in a local fashion to interfere with the activity of activators or basal promoters within approximately 100 bp. In contrast, long-range repressors such as Hairy act over distances >1 kb. The functional distinction between these two classes of repressors has been suggested to stem from the differential recruitment of the CtBP corepressor to short-range repressors and Groucho to long-range repressors. Contrary to this differential recruitment model, we report that Groucho is a functional part of the Knirps short-range repression complex. The corepressor interaction is mediated via an eh-1 like motif present in the N terminus and a conserved region present in the central portion of Knirps. We also show that this interaction is important for the CtBP-independent repression activity of Knirps and is required for regulation of even-skipped. Our study uncovers a previously uncharacterized interaction between proteins previously thought to function in distinct repression pathways, and indicates that the Groucho corepressor can be differentially harnessed to execute short- and long-range repression.

Indexed as

Amino Acid SequenceAnimalsBasic Helix-Loop-Helix ProteinsDNADrosophilaDrosophila ProteinsEmbryo, NonmammalianGene Expression RegulationHomeodomain ProteinsKineticsMolecular Sequence DataMutagenesisPhenotypePromoter Regions, GeneticRepressor ProteinsSequence AlignmentBasic Helix-Loop-Helix ProteinsDNADrosophila Proteinseve protein, Drosophilagro protein, DrosophilaHomeodomain Proteinskni protein, DrosophilaRepressor ProteinsTissue ExtractsTranscription Factors

Identifiers

PMID19805071
PMCPMC2765075

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.