Evidence map›Paper›PMID 19804716›Full record

ArticleBiophysical journal2009

Low-affinity Ca2+ indicators compared in measurements of skeletal muscle Ca2+ transients.

Stephen Hollingworth, Kyle R Gee, Stephen M Baylor

Open access · bronzeAbstract readComparative Study
In one paragraph

Article in Biophysical journal, 2009. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 27 papers.

0numbers the graph read from it
0cells of the map it votes in
27citing papers in PubMed
1.6field-weighted citation impact, top 18% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

27 citing papers in PubMed, 40 citations in OpenAlex.

  1. Article
  2. Article
  3. Review
  4. Review
  5. Review
  6. Modeling and simulation of excitation- contraction coupling of fast-twitch skeletal muscle fibers.Technology and health care : official journal of the European Society for Engineering and Medicine · 2020
    Article
  7. Extraocular muscle function is impaired inThe Journal of general physiology · 2019
    Article
  8. Review
  9. Review
  10. Small CaThe Journal of general physiology · 2018
    Article
  11. Article
  12. Article
  13. Article
  14. Modeling CaFrontiers in physiology · 2016
    Article
  15. Article
  16. Article
  17. Review
  18. Article
  19. Article
  20. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

3 authors at 1 institution in 1 country.

Stephen HollingworthDepartment of Physiology, University of Pennsylvania School of Medicine, Philadelphia, Pennsylvania, USA.
Kyle R Gee
Stephen M Baylor
University of Pennsylvania · US

Funding

Intracellular calcium signaling in normal and diseased mammalian skeletal muscle R01GM086167 · NIGMS · UNIVERSITY OF PENNSYLVANIA · PI BAYLOR, STEPHEN M. · 2008 to 2011
$1.3M
NIGMS NIH HHS GM 86167NIGMS NIH HHS R01 GM086167
6 · The paper itself

Abstract

The low-affinity fluorescent Ca(2+) indicators OGB-5N, Fluo-5N, fura-5N, Rhod-5N, and Mag-fluo-4 were evaluated for their ability to accurately track the kinetics of the spatially averaged free Ca(2+) transient (Delta[Ca(2+)]) in skeletal muscle. Frog single fibers were injected with one of the above indicators and, usually, furaptra (previously shown to rapidly track Delta[Ca(2+)]). In response to an action potential, the full duration at half-maximum of the indicator's fluorescence change (DeltaF) was found to be larger with OGB-5N, Fluo-5N, fura-5N, and Rhod-5N than with furaptra; thus, these indicators do not track Delta[Ca(2+)] with kinetic fidelity. In contrast, the DeltaF time course of Mag-fluo-4 was identical to furaptra's; thus, Mag-fluo-4 also yields reliable kinetic information about Delta[Ca(2+)]. Mag-fluo-4's DeltaF has a larger signal/noise ratio than furaptra's (for similar indicator concentrations), and should thus be more useful for tracking Delta[Ca(2+)] in small cell volumes. However, because the resting fluorescence of Mag-fluo-4 probably arises largely from indicator that is bound with Mg(2+), the amplitude of the Mag-fluo-4 signal, and its calibration in Delta[Ca(2+)] units, is likely to be more sensitive to variations in [Mg(2+)] than furaptra's.

Indexed as

AnimalsCalciumDiffusionFluorescent DyesKineticsMuscle Fibers, SkeletalMuscle, SkeletalSignal TransductionCalciumFluorescent Dyes

Identifiers

PMID19804716
PMCPMC2756385
OpenAlexW2013408022

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.