Evidence map›Paper›PMID 19800864›Full record

ArticleBiochemical and biophysical research communications2009

Characterization of the Drosophila melanogaster Dis3 ribonuclease.

Megan Mamolen, Erik D Andrulis

Open access · greenAbstract read
In one paragraph

Article in Biochemical and biophysical research communications, 2009. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 6 papers.

0numbers the graph read from it
0cells of the map it votes in
6citing papers in PubMed
0.9field-weighted citation impact, top 26% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

6 citing papers in PubMed, 12 citations in OpenAlex.

  1. Article
  2. Article
  3. Dis3- and exosome subunit-responsive 3' mRNA instability elements.Biochemical and biophysical research communications · 2012
    Article
  4. Article
  5. Review
  6. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

2 authors at 1 institution in 1 country.

Megan MamolenDepartment of Molecular Biology and Microbiology and Program in Cell Biology, Case Western Reserve University School of Medicine, Cleveland, OH 44106, USA.
Erik D Andrulis
Case Western Reserve University · US

Funding

TRAINING IN NORMAL AND ABNORMAL DEVELOPMENTT32HD007104 · NICHD · CASE WESTERN RESERVE UNIVERSITY · PI HARTE, PETER J. · 1985 to 2010
$3.5M
Compartmentalized Exosome Structure and FunctionR01GM072820 · NIGMS · CASE WESTERN RESERVE UNIVERSITY · PI ANDRULIS, ERIK D · 2006 to 2010
$1.4M
NICHD NIH HHS T32HD007104NIGMS NIH HHS GM072820NIGMS NIH HHS R01 GM072820
6 · The paper itself

Abstract

The Dis3 ribonuclease is a member of the hydrolytic RNR protein family. Although much progress has been made in understanding the structure, function, and enzymatic activities of prokaryotic RNR family members RNase II and RNase R, there are no activity studies of the metazoan ortholog, Dis3. Here, we characterize the activity of the Drosophila melanogaster Dis3 (dDis3) protein. We find that dDis3 is active in the presence of various monovalent and divalent cations, and requires divalent cations for activity. dDis3 hydrolyzes compositionally distinct RNA substrates, yet releases different products depending upon the substrate. Additionally, dDis3 remains active when lacking N-terminal domains, suggesting that an independent active site resides in the C-terminus of the protein. Finally, a study of dDis3 interactions with dRrp6 and core exosome subunits in extracts revealed sensitivity to higher divalent cation concentrations and detergent, suggesting the presence of both ionic and hydrophobic interactions in dDis3-exosome complexes. Our study thus broadens our mechanistic understanding of the general ribonuclease activity of Dis3 and RNR family members.

Indexed as

AnimalsDrosophila melanogasterDrosophila ProteinsEnzyme StabilityExosome Multienzyme Ribonuclease ComplexExosomesProtein Structure, TertiaryRibonucleasesSubstrate SpecificityDis3 protein, DrosophilaDrosophila ProteinsExosome Multienzyme Ribonuclease ComplexRibonucleasesRrp6 protein, Drosophila

Identifiers

PMID19800864
PMCPMC2787996
OpenAlexW2073205707

What OpenQuestion holds

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Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.