Evidence map›Paper›PMID 19800332›Full record

ReviewFEBS letters2009

Spatially distributed cell signalling.

Boris N Kholodenko

Abstract readReview
In one paragraph

Review in FEBS letters, 2009. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 29 papers.

0numbers the graph read from it
0cells of the map it votes in
29citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

29 citing papers in PubMed.

  1. Review
  2. Review
  3. Review
  4. A spatial model of YAP/TAZ signaling reveals how stiffness, dimensionality, and shape contribute to emergent outcomes.Proceedings of the National Academy of Sciences of the United States of America · 2021
    Article
  5. Mad dephosphorylation at the nuclear pore is essential for asymmetric stem cell division.Proceedings of the National Academy of Sciences of the United States of America · 2021
    Article
  6. Article
  7. Article
  8. Article
  9. Article
  10. Review
  11. Review
  12. Article
  13. Article
  14. Article
  15. Article
  16. Dynamics of gradient formation by intracellular shuttling.The Journal of chemical physics · 2015
    Article
  17. Review
  18. Article
  19. Complexity of receptor tyrosine kinase signal processing.Cold Spring Harbor perspectives in biology · 2013
    Review
  20. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

1 author.

Boris N KholodenkoSystems Biology Ireland, University College Dublin, Belfield, Dublin 4, Ireland. Boris.Kholodenko@ucd.ie

Funding

Receptor Tyrosine Kinase Signaling NetworksR01GM059570 · NIGMS · THOMAS JEFFERSON UNIVERSITY · PI HOEK, JOANNES B · 2000 to 2010
$3.6M
Mechanisms of Central Autonomic Orchestration of Blood PressureR33HL088283 · NHLBI · THOMAS JEFFERSON UNIVERSITY · PI VADIGEPALLI, RAJANIKANTH · 2006 to 2008
$846k
NHLBI NIH HHS R33 HL088283NHLBI NIH HHS R33HL088283NIGMS NIH HHS GM059570NIGMS NIH HHS R01 GM059570
6 · The paper itself

Abstract

Emerging evidence indicates that complex spatial gradients and (micro)domains of signalling activities arise from distinct cellular localization of opposing enzymes, such as a kinase and phosphatase, in signal transduction cascades. Often, an interacting, active form of a target protein has a lower diffusivity than an inactive form, and this leads to spatial gradients of the protein abundance in the cytoplasm. A spatially distributed signalling cascade can create step-like activation profiles, which decay at successive distances from the cell surface, assigning digital positional information to different regions in the cell. Feedback and feedforward network motifs control activity patterns, allowing signalling networks to serve as cellular devices for spatial computations.

Indexed as

Feedback, PhysiologicalMAP Kinase Signaling SystemProtein Processing, Post-TranslationalBiological TransportCell PolarityCell SizePhosphoproteinsPhosphoproteins

Identifiers

PMID19800332
PMCPMC2795127

What OpenQuestion holds

Textmetadata
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Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.