Evidence map›Paper›PMID 19798055›Full record

ArticleThe EMBO journal2009

Failed gene conversion leads to extensive end processing and chromosomal rearrangements in fission yeast.

Helen Tinline-Purvis, Andrew P Savory, Jason K Cullen, Anoushka Davé, Jennifer Moss, Wendy L Bridge, Samuel Marguerat, Jürg Bähler, Jiannis Ragoussis, Richard Mott and 2 more

Open access · bronzeAbstract read
In one paragraph

Article in The EMBO journal, 2009. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 35 papers.

0numbers the graph read from it
0cells of the map it votes in
35citing papers in PubMed
1.7field-weighted citation impact, top 16% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

35 citing papers in PubMed, 53 citations in OpenAlex.

  1. Article
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  11. Genetic interaction of the histone chaperonemicroPublication biology · 2022
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  12. Article
  13. RAD51: Beyond the break.Seminars in cell & developmental biology · 2021
    Review
  14. Article
  15. Genes · 2020
    Review
  16. Review
  17. Article
  18. Review
  19. Review
  20. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

12 authors at 4 institutions in 1 country.

Helen Tinline-PurvisCRUK-MRC Gray Institute for Radiation Oncology and Biology, University of Oxford, Oxford, Oxfordshire, UK.
Andrew P Savory
Jason K Cullen
Anoushka Davé
Jennifer Moss
Wendy L Bridge
Samuel Marguerat
Jürg Bähler
Jiannis Ragoussis
Richard Mott
Carol A Walker
Timothy C Humphrey
University of Oxford · GBCRUK/MRC Oxford Institute for Radiation Oncology · GBUniversity College London · GBCentre for Human Genetics · GB

Funding

Cancer Research UKMedical Research Council G0700730Medical Research Council MC_U142784382
6 · The paper itself

Abstract

Loss of heterozygosity (LOH), a causal event in cancer and human genetic diseases, frequently encompasses multiple genetic loci and whole chromosome arms. However, the mechanisms by which such extensive LOH arises, and how it is suppressed in normal cells is poorly understood. We have developed a genetic system to investigate the mechanisms of DNA double-strand break (DSB)-induced extensive LOH, and its suppression, using a non-essential minichromosome, Ch(16), in fission yeast. We find extensive LOH to arise from a new break-induced mechanism of isochromosome formation. Our data support a model in which Rqh1 and Exo1-dependent end processing from an unrepaired DSB leads to removal of the broken chromosome arm and to break-induced replication of the intact arm from the centromere, a considerable distance from the initial lesion. This process also promotes genome-wide copy number variation. A genetic screen revealed Rhp51, Rhp55, Rhp57 and the MRN complex to suppress both isochromosome formation and chromosome loss, in accordance with these events resulting from extensive end processing associated with failed homologous recombination repair.

Indexed as

DNA Breaks, Double-StrandedGene ConversionLoss of HeterozygosityAdenosine TriphosphatasesCentromereChromosomes, FungalDNA-Binding ProteinsRad51 RecombinaseSchizosaccharomycesSchizosaccharomyces pombe ProteinsAdenosine TriphosphatasesDNA-Binding ProteinsRad51 RecombinaseRHP51 protein, S pombeRHP55 protein, S pombeRhp57 protein, S pombeSchizosaccharomyces pombe Proteins

Identifiers

PMID19798055
PMCPMC2776099
OpenAlexW2003090033

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.