Evidence map›Paper›PMID 19794129›Full record

ArticleMolecular pharmacology2009

Control of glutamate receptor 2 (GluR2) translational initiation by its alternative 3' untranslated regions.

Hasan A Irier, Yi Quan, Justin Yoo, Raymond Dingledine

Open access · bronzeAbstract read
In one paragraph

Article in Molecular pharmacology, 2009. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 3 papers.

0numbers the graph read from it
0cells of the map it votes in
3citing papers in PubMed
0.5field-weighted citation impact, top 35% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

3 citing papers in PubMed, 7 citations in OpenAlex.

  1. Article
  2. Article
  3. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

4 authors at 1 institution in 1 country.

Hasan A IrierDepartment of Pharmacology, Emory University School of Medicine, Rollins Research Center, Room 5002, 1510 Clifton Rd NE, Atlanta, GA 30322, USA. hirier@emory.edu
Yi Quan
Justin Yoo
Raymond Dingledine
Emory University · US

Funding

Prostanoid modulators that reduce brain injury and inflammation after seizuresU01NS058158 · NINDS · EMORY UNIVERSITY · PI DINGLEDINE, RAYMOND J · 2006 to 2015
$5.9M
GENETIC CONTROL OF GLUTAMATE RECEPTOR FUNCTIONR01NS036604 · NINDS · EMORY UNIVERSITY · PI DINGLEDINE, RAYMOND J · 1998 to 2008
$3.0M
NINDS NIH HHS R01 NS036604NINDS NIH HHS R01-NS036604NINDS NIH HHS U01 NS058158
6 · The paper itself

Abstract

Four major glutamate receptor 2 (GluR2) transcripts differing in size (approximately 4 and approximately 6 kilobases) due to alternative 3' untranslated regions (UTRs), and also containing alternative 5'UTRs, exist in the brain. Both the long 5'UTR and long 3'UTR repress translation of GluR2 mRNA; repression by the 3'UTR is relieved after seizures. To understand the mechanism of translational repression, we used rabbit reticulocyte lysates as an in vitro translation system to examine the expression profiles of firefly reporter mRNAs bearing alternative combinations of GluR2 5'UTR and 3'UTR in the presence of inhibitors of either translational elongation or initiation. Translation of reporter mRNAs bearing the long GluR2 3'UTR was insensitive to low concentrations of the translation elongation inhibitors cycloheximide (0.7-70 nM) and anisomycin (7.5-750 nM), in contrast to a reporter bearing the short 3'UTR, which was inhibited. These data suggest that the rate-limiting step for translation of GluR2 mRNA bearing the long 3'UTR is not elongation. Regardless of the GluR2 UTR length, translation of all reporter mRNAs was equally sensitive to desmethyl-desamino-pateamine A (0.2-200 nM), an initiation inhibitor. Kasugamycin, which can facilitate recognition of certain mRNAs by ribosomes leading to alternative initiation, had no effect on translation of a capped reporter bearing both short 5'UTR and short 3'UTR, but increased the translation rate of reporters bearing either the long GluR2 5'UTR or long 3'UTR. Our findings suggest that both the long 5'UTR and long 3'UTR of GluR2 mRNA repress translation at the initiation step.

Indexed as

3' Untranslated Regions5' Untranslated RegionsAminoglycosidesAnimalsAnisomycinCycloheximideEpoxy CompoundsGene Expression RegulationMacrolidesPeptide Chain Initiation, TranslationalProtein BiosynthesisProtein Synthesis InhibitorsRabbitsReceptors, AMPAReticulocytesRNA, Messenger3' Untranslated Regions5' Untranslated RegionsAminoglycosidesAnisomycinCycloheximideEpoxy Compoundsglutamate receptor ionotropic, AMPA 2kasugamycinMacrolidespateamine AProtein Synthesis InhibitorsReceptors, AMPARNA, MessengerThiazoles

Identifiers

PMID19794129
PMCPMC2784723
OpenAlexW1990628156

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.