Evidence map›Paper›PMID 19794119›Full record

ArticleThe Plant cell2009

The ABC transporter PXA1 and peroxisomal beta-oxidation are vital for metabolism in mature leaves of Arabidopsis during extended darkness.

Hans-Henning Kunz, Michael Scharnewski, Kirstin Feussner, Ivo Feussner, Ulf-Ingo Flügge, Martin Fulda, Markus Gierth

Abstract read
In one paragraph

Article in The Plant cell, 2009. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 78 papers, 1 of them a synthesis that pooled it.

0numbers the graph read from it
0cells of the map it votes in
78citing papers in PubMed, 1 pooled it
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

78 citing papers in PubMed, 1 synthesis or guideline pooled it.

  1. Pooled it
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  15. Overexpression of Peroxisome-LocalizedInternational journal of molecular sciences · 2022
    Article
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  19. Article
  20. Peroxisomal ABC Transporters: An Update.International journal of molecular sciences · 2021
    Review

18 more citing papers are in PubMed but not listed here.

4 · The record

Corrections and comments

5 · Who and what money

Authors and funding

7 authors.

Hans-Henning KunzDepartment of Botany II, University of Cologne, Koeln, Germany.
Michael Scharnewski
Kirstin Feussner
Ivo Feussner
Ulf-Ingo Flügge
Martin Fulda
Markus Gierth

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Fatty acid beta-oxidation is essential for seedling establishment of oilseed plants, but little is known about its role in leaf metabolism of adult plants. Arabidopsis thaliana plants with loss-of-function mutations in the peroxisomal ABC-transporter1 (PXA1) or the core beta-oxidation enzyme keto-acyl-thiolase 2 (KAT2) have impaired peroxisomal beta-oxidation. pxa1 and kat2 plants developed severe leaf necrosis, bleached rapidly when returned to light, and died after extended dark treatment, whereas the wild type was unaffected. Dark-treated pxa1 plants showed a decrease in photosystem II efficiency early on and accumulation of free fatty acids, mostly alpha-linolenic acid [18:3(n-3)] and pheophorbide a, a phototoxic chlorophyll catabolite causing the rapid bleaching. Isolated wild-type and pxa1 chloroplasts challenged with comparable alpha-linolenic acid concentrations both showed an 80% reduction in photosynthetic electron transport, whereas intact pxa1 plants were more susceptible to the toxic effects of alpha-linolenic acid than the wild type. Furthermore, starch-free mutants with impaired PXA1 function showed the phenotype more quickly, indicating a link between energy metabolism and beta-oxidation. We conclude that the accumulation of free polyunsaturated fatty acids causes membrane damage in pxa1 and kat2 plants and propose a model in which fatty acid respiration via peroxisomal beta-oxidation plays a major role in dark-treated plants after depletion of starch reserves.

Indexed as

Adenosine TriphosphatasesAdenosine Triphosphatealpha-Linolenic AcidArabidopsisArabidopsis ProteinsATP-Binding Cassette TransportersChlorophyllCloning, MolecularDarknessDNA, BacterialMutagenesis, InsertionalMutationOxidation-ReductionPeroxisomesPhotosynthesisPhotosystem II Protein ComplexAdenosine TriphosphatasesAdenosine Triphosphatealpha-Linolenic AcidArabidopsis ProteinsAt4g39850 protein, ArabidopsisATP-Binding Cassette TransportersChlorophyllDNA, BacterialKAT2 protein, Arabidopsispheophorbide aPhotosystem II Protein ComplexPotassium Channels, Voltage-GatedStarchT-DNA

Identifiers

PMID19794119
PMCPMC2768912

What OpenQuestion holds

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.