Evidence map›Paper›PMID 19793863›Full record

ArticleGenes & development2009

The annealing helicase HARP is recruited to DNA repair sites via an interaction with RPA.

Timur Yusufzai, Xiangduo Kong, Kyoko Yokomori, James T Kadonaga

Open access · diamondAbstract read
In one paragraph

Article in Genes & development, 2009. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 97 papers.

0numbers the graph read from it
0cells of the map it votes in
97citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

97 citing papers in PubMed, 132 citations in OpenAlex.

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  4. HeterozygousGenes & development · 2024
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37 more citing papers are in PubMed but not listed here.

4 · The record

Corrections and comments

5 · Who and what money

Authors and funding

4 authors at 2 institutions in 1 country.

Timur YusufzaiSection of Molecular Biology, University of California at San Diego, La Jolla, California 92093, USA.
Xiangduo Kong
Kyoko Yokomori
James T Kadonaga
University of California, Irvine · USUniversity of California, San Diego · US

Funding

Univ.of Calif., Irvine Cancer Center Support GrantP30CA062203 · NCI · UNIVERSITY OF CALIFORNIA-IRVINE · PI Christine Hui · 1994 to 2026
$57.9M
DNA REPLICATION COUPLED CHROMATIN ASSEMBLYR01GM058272 · NIGMS · UNIVERSITY OF CALIFORNIA, SAN DIEGO · PI KADONAGA, JAMES T. · 1999 to 2015
$4.8M
Molecular mechanism of DNA damage recognition in mammalsR01CA100710 · NCI · UNIVERSITY OF CALIFORNIA-IRVINE · PI YOKOMORI, KYOKO · 2004 to 2008
$1.2M
Characterization of novel core promoter elementsF32GM076936 · NIGMS · UNIVERSITY OF CALIFORNIA, SAN DIEGO · PI YUSUFZAI, TIMUR · 2006 to 2007
$95k
NCI NIH HHS CA100710NCI NIH HHS P30 CA062203NCI NIH HHS R01 CA100710NIGMS NIH HHS F32 GM076936NIGMS NIH HHS F32 GM76936NIGMS NIH HHS GM058272NIGMS NIH HHS R01 GM058272
6 · The paper itself

Abstract

HepA-related protein (HARP) (also known as SMARCAL1) is an ATP-driven annealing helicase that catalyzes the formation of dsDNA from complementary Replication protein A (RPA)-bound ssDNA. Here we find that HARP contains a conserved N-terminal motif that is necessary and sufficient for binding to RPA. This RPA-binding motif is not required for annealing helicase activity, but is essential for the recruitment of HARP to sites of laser-induced DNA damage. These findings suggest that the interaction of HARP with RPA increases the concentration of annealing helicase activity in the vicinity of ssDNA regions to facilitate processes such as DNA repair.

Indexed as

Amino Acid MotifsAnimalsDNA DamageDNA HelicasesDNA RepairHeLa CellsHumansMiceProtein BindingProtein StabilityReplication Protein ADNA HelicasesReplication Protein ASMARCAL1 protein, human

Identifiers

PMID19793863
PMCPMC2764493
OpenAlexW2159414441

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.