Evidence map›Paper›PMID 19793861›Full record

ArticleGenes & development2009

The annealing helicase SMARCAL1 maintains genome integrity at stalled replication forks.

Carol E Bansbach, Rémy Bétous, Courtney A Lovejoy, Gloria G Glick, David Cortez

Open access · diamondAbstract read
In one paragraph

Article in Genes & development, 2009. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 184 papers.

0numbers the graph read from it
0cells of the map it votes in
184citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

184 citing papers in PubMed, 251 citations in OpenAlex.

  1. Review
  2. Review
  3. Article
  4. Article
  5. SMARCAL1 is a new osteosarcoma predisposition gene.Journal of the National Cancer Institute · 2026
    Article
  6. Article
  7. Article
  8. Article
  9. Article
  10. Review
  11. Article
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  15. HeterozygousGenes & development · 2024
    Article
  16. Review
  17. RAD52 prevents accumulation ofbioRxiv : the preprint server for biology · 2024
    Article
  18. Review
  19. Review
  20. Article

124 more citing papers are in PubMed but not listed here.

4 · The record

Corrections and comments

5 · Who and what money

Authors and funding

5 authors at 2 institutions in 2 countries.

Carol E BansbachDepartment of Biochemistry, Vanderbilt University School of Medicine, Nashville, Tennessee 37232, USA.
Rémy Bétous
Courtney A Lovejoy
Gloria G Glick
David Cortez
Vanderbilt University · USInnovations thérapeutiques et résistances

Funding

TISSUE CoreP50CA098131 · NCI · VANDERBILT UNIVERSITY MEDICAL CENTER · PI PARK, BEN HO, PIETENPOL, JENNIFER A · 2003 to 2024
$48.7M
Structural Biology Facility CoreP30ES000267 · NIEHS · VANDERBILT UNIVERSITY · PI GUENGERICH, F PETER · 1985 to 2014
$20.3M
Functional Analysis of Replication Stress Response ProteinsR01CA136933 · NCI · VANDERBILT UNIVERSITY · PI CORTEZ, DAVID K · 2009 to 2013
$1.6M
Regulation of Genome Stability by ATMR21CA132010 · NCI · VANDERBILT UNIVERSITY · PI CORTEZ, DAVID K · 2008 to 2009
$380k
NCI NIH HHS P50 CA098131NCI NIH HHS R01 CA136933NCI NIH HHS R21 CA132010NCI NIH HHS R21CA132010NIEHS NIH HHS P30 ES000267
6 · The paper itself

Abstract

Mutations in SMARCAL1 (HARP) cause Schimke immunoosseous dysplasia (SIOD). The mechanistic basis for this disease is unknown. Using functional genomic screens, we identified SMARCAL1 as a genome maintenance protein. Silencing and overexpression of SMARCAL1 leads to activation of the DNA damage response during S phase in the absence of any genotoxic agent. SMARCAL1 contains a Replication protein A (RPA)-binding motif similar to that found in the replication stress response protein TIPIN (Timeless-Interacting Protein), which is both necessary and sufficient to target SMARCAL1 to stalled replication forks. RPA binding is critical for the cellular function of SMARCAL1; however, it is not necessary for the annealing helicase activity of SMARCAL1 in vitro. An SIOD-associated SMARCAL1 mutant fails to prevent replication-associated DNA damage from accumulating in cells in which endogenous SMARCAL1 is silenced. Ataxia-telangiectasia mutated (ATM), ATM and Rad3-related (ATR), and DNA-dependent protein kinase (DNA-PK) phosphorylate SMARCAL1 in response to replication stress. Loss of SMARCAL1 activity causes increased RPA loading onto chromatin and persistent RPA phosphorylation after a transient exposure to replication stress. Furthermore, SMARCAL1-deficient cells are hypersensitive to replication stress agents. Thus, SMARCAL1 is a replication stress response protein, and the pleiotropic phenotypes of SIOD are at least partly due to defects in genome maintenance during DNA replication.

Indexed as

DNA ReplicationGenomic InstabilityCell LineChromatinDNA HelicasesGene Expression RegulationHeLa CellsHumansMutationOsteochondrodysplasiasPhosphorylationProtein BindingReplication Protein AChromatinDNA HelicasesReplication Protein ASMARCAL1 protein, human

Identifiers

PMID19793861
PMCPMC2764496
OpenAlexW2133940489

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.