Evidence map›Paper›PMID 19789848›Full record

ArticleTAG. Theoretical and applied genetics. Theoretische und angewandte Genetik2009

Fine mapping, physical mapping and development of diagnostic markers for the Rrs2 scald resistance gene in barley.

Anja Hanemann, Günther F Schweizer, Roberto Cossu, Thomas Wicker, Marion S Röder

Abstract read
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In one paragraph

Article in TAG. Theoretical and applied genetics. Theoretische und angewandte Genetik, 2009. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 24 papers.

0numbers the graph read from it
0cells of the map it votes in
24citing papers in PubMed
4.2field-weighted citation impact, top 7% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

24 citing papers in PubMed, 50 citations in OpenAlex.

  1. Article
  2. Article
  3. Article
  4. Identification of sources of resistance to scald (Frontiers in plant science · 2023
    Article
  5. Pyramiding of scald resistance genes in four spring barley MAGIC populations.TAG. Theoretical and applied genetics. Theoretische und angewandte Genetik · 2021
    Article
  6. Article
  7. Review
  8. Article
  9. Article
  10. Article
  11. Characterisation of barley resistance to rhynchosporium on chromosome 6HS.TAG. Theoretical and applied genetics. Theoretische und angewandte Genetik · 2019
    Article
  12. Resistance to Rhynchosporium commune in a collection of European spring barley germplasm.TAG. Theoretical and applied genetics. Theoretische und angewandte Genetik · 2018
    Article
  13. Article
  14. Review
  15. Article
  16. Article
  17. Fine mapping of the Rrs1 resistance locus against scald in two large populations derived from Spanish barley landraces.TAG. Theoretical and applied genetics. Theoretische und angewandte Genetik · 2013
    Article
  18. Review
  19. Article
  20. Genomics-based high-resolution mapping of the BaMMV/BaYMV resistance gene rym11 in barley (Hordeum vulgare L.).TAG. Theoretical and applied genetics. Theoretische und angewandte Genetik · 2013
    Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

5 authors at 3 institutions in 2 countries.

Anja HanemannLeibniz Institute of Plant Genetics and Crop Plant Research (IPK), Corrensstr. 3, 06466, Gatersleben, Germany. hanemann@ipk-gatersleben.de
Günther F Schweizer
Roberto Cossu
Thomas Wicker
Marion S Röder
Leibniz Institute of Plant Genetics and Crop Plant Research · DEBayerische Landesanstalt für Wald und Forstwirtschaft · DEUniversity of Zurich · CH

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

The Rrs2 gene confers resistance to the fungal pathogen Rhynchosporium secalis which causes leaf scald, a major barley disease. The Rrs2 gene was fine mapped to an interval of 0.08 cM between markers 693M6_6 and P1D23R on the distal end of barley chromosome 7HS using an Atlas (resistant) x Steffi (susceptible) mapping population of 9,179 F(2)-plants. The establishment of a physical map of the Rrs2 locus led to the discovery that Rrs2 is located in an area of suppressed recombination within this mapping population. The analysis of 58 barley genotypes revealed a large linkage block at the Rrs2 locus extending over several hundred kb which is present only in Rrs2 carrying cultivars. Due to the lack of recombination in the mapping population and the presence of a Rrs2-specific linkage block, we assume a local chromosomal rearrangement (alien introgression or inversion) in Rrs2 carrying varieties. The variety analysis led to the discovery of eight SNPs which were diagnostic for the Rrs2 phenotype. Based on these SNPs diagnostic molecular markers (CAPS and pyrosequencing markers) were developed which are highly useful for marker-assisted selection in resistance gene pyramiding programmes for Rhynchosporium secalis resistance in barley.

Indexed as

AscomycotaGenes, PlantChromosomes, Artificial, BacterialCluster AnalysisContig MappingGenetic MarkersGenome, PlantHordeumImmunity, InnatePhenotypePhylogenyPlant DiseasesPolymorphism, Single NucleotideGenetic Markers

Identifiers

PMID19789848
OpenAlexW1969710195

What OpenQuestion holds

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Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.