Evidence map›Paper›PMID 19789627›Full record

ArticlePloS one2009

Soybean GmPHD-type transcription regulators improve stress tolerance in transgenic Arabidopsis plants.

Wei Wei, Jian Huang, Yu-Jun Hao, Hong-Feng Zou, Hui-Wen Wang, Jing-Yun Zhao, Xue-Yi Liu, Wan-Ke Zhang, Biao Ma, Jin-Song Zhang and 1 more

Abstract read
In one paragraph

Article in PloS one, 2009. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 61 papers.

0numbers the graph read from it
0cells of the map it votes in
61citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

61 citing papers in PubMed.

  1. Article
  2. Article
  3. Article
  4. Review
  5. Article
  6. Article
  7. Functional characterization ofFrontiers in plant science · 2026
    Article
  8. Article
  9. Article
  10. Genome-Wide Characterization of Alfin-like Genes inPlants (Basel, Switzerland) · 2024
    Article
  11. Article
  12. Article
  13. Article
  14. Article
  15. Article
  16. Twenty years of mining salt tolerance genes in soybean.Molecular breeding : new strategies in plant improvement · 2023
    Article
  17. Article
  18. Article
  19. Review
  20. Article

1 more citing papers are in PubMed but not listed here.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

11 authors.

Wei WeiPlant Gene Research Center, National Key Laboratory of Plant Genomics, Institute of Genetics and Developmental Biology, Chinese Academy of Sciences, Beijing, China.
Jian Huang
Yu-Jun Hao
Hong-Feng Zou
Hui-Wen Wang
Jing-Yun Zhao
Xue-Yi Liu
Wan-Ke Zhang
Biao Ma
Jin-Song Zhang
Shou-Yi Chen

Funding

Mechanisms and consequences of CNS aneuploidies altered by fetal ethanol exposureR01AA021402 · NIAAA · SCRIPPS RESEARCH INSTITUTE, THE · PI CHUN, JEROLD · 2013 to 2017
$1.9M
NIAAA NIH HHS R01 AA021402
6 · The paper itself

Abstract

backgroundSoybean [Glycine max (L.) Merr.] is one of the most important crops for oil and protein resource. Improvement of stress tolerance will be beneficial for soybean seed production. PRINCIPAL

findingsSix GmPHD genes encoding Alfin1-type PHD finger protein were identified and their expressions differentially responded to drought, salt, cold and ABA treatments. The six GmPHDs were nuclear proteins and showed ability to bind the cis-element "GTGGAG". The N-terminal domain of GmPHD played a major role in DNA binding. Using a protoplast assay system, we find that GmPHD1 to GmPHD5 had transcriptional suppression activity whereas GmPHD6 did not have. In yeast assay, the GmPHD6 can form homodimer and heterodimer with the other GmPHDs except GmPHD2. The N-terminal plus the variable regions but not the PHD-finger is required for the dimerization. Transgenic Arabidopsis plants overexpressing the GmPHD2 showed salt tolerance when compared with the wild type plants. This tolerance was likely achieved by diminishing the oxidative stress through regulation of downstream genes. SIGNIFICANCE: These results provide important clues for soybean stress tolerance through manipulation of PHD-type transcription regulator.

Indexed as

Gene Expression Regulation, PlantAmino Acid SequenceArabidopsisCloning, MolecularDimerizationGene Expression ProfilingGlycine maxMolecular Sequence DataPlants, Genetically ModifiedProtein BindingProtein Structure, TertiaryProtoplastsSequence Homology, Amino AcidSoybean ProteinsStress, PhysiologicalTranscription FactorsSoybean ProteinsTranscription Factors

Identifiers

PMID19789627
PMCPMC2747011

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.