Evidence map›Paper›PMID 19789346›Full record

ArticleCancer research2009

Role of SV40 integration site at chromosomal interval 1q21.1 in immortalized CRL2504 cells.

Jinglan Liu, Gurpreet Kaur, Vikramjit K Zhawar, Drazen B Zimonjic, Nicholas C Popescu, Raj P Kandpal, Raghbir S Athwal

Open access · bronzeAbstract read
In one paragraph

Article in Cancer research, 2009. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 3 papers.

0numbers the graph read from it
0cells of the map it votes in
3citing papers in PubMed
0.4field-weighted citation impact, top 32% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

3 citing papers in PubMed, 3 citations in OpenAlex.

  1. Review
  2. Review
  3. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

7 authors at 3 institutions in 1 country.

Jinglan LiuFels Institute for Cancer Research and Molecular Biology, Temple University School of Medicine, Philadelphia,PA 19140,USA.
Gurpreet Kaur
Vikramjit K Zhawar
Drazen B Zimonjic
Nicholas C Popescu
Raj P Kandpal
Raghbir S Athwal
Temple University · USNational Cancer Institute · USWestern University of Health Sciences · US

Funding

Molecular Cytogenetics of Solid TumorsZIABC010038 · NCI · DIVISION OF BASIC SCIENCES - NCI · PI POPESCU, NICOLAE · 2009 to 2012
$4.5M
CLONING AND ANALYSIS OF SENESCENCE GENES FOR TUMOR CELLSR01CA074983 · NCI · TEMPLE UNIVERSITY · PI ATHWAL, RAGHBIR S · 1999 to 2001
$466k
NCI NIH HHS CA74983NCI NIH HHS R01 CA074983
6 · The paper itself

Abstract

We have applied a functional gene transfer strategy to show the importance of viral integration site in cellular immortalization. The large tumor antigen of SV40 is capable of extending the cellular life span by sequestering tumor suppressor proteins pRB and p53 in virus-transformed human cells. Although SV40 large T antigen is essential, it is not sufficient for cellular immortalization, suggesting that additional alterations in cellular genes are required to attain infinite proliferation. We show here that the disruption of human chromosomal interval at 1q21.1 by SV40 integration can be an essential step for cellular immortalization. The transfer of a 150-kb bacterial artificial chromosome (BAC) clone, RP364B14, corresponding to viral integration site in CRL2504 cells, reverted their immortal phenotype. Interestingly, the BAC transfer clones of CRL2504 cells displayed characteristics of either senescence as shown by beta-galactosidase activity or apoptosis as revealed by positive staining with M30 CytoDEATH antibody. The SV40 integration at 1q21.1, in the vicinity of epidermal differentiation complex (EDC) genes, resulted in the down-regulation of the filaggrin (FLG) gene that is part of the EDC. FLG gene expression was increased in BAC transfer senescent and apoptotic clones. Our results suggest that the disruption of native genomic sequence by SV40 may alter expression of genes involved in senescence and apoptosis by modulating chromatin structure. These studies imply that identification of genes located in the vicinity of viral integration sites in human cancers may be helpful in developing new diagnostic and therapeutic strategies.

Indexed as

Chromosomes, Human, Pair 1Virus IntegrationAntigens, Polyomavirus TransformingApoptosisBase SequenceBronchiCell Line, TransformedCell Transformation, ViralCellular SenescenceChromosomes, Artificial, BacterialCloning, MolecularEpithelial CellsFilaggrin ProteinsGene Transfer TechniquesHumansIntermediate Filament ProteinsAntigens, Polyomavirus TransformingFilaggrin ProteinsFLG protein, humanIntermediate Filament Proteins

Identifiers

PMID19789346
PMCPMC2913896
OpenAlexW2001385291

What OpenQuestion holds

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Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.