ArticleTAG. Theoretical and applied genetics. Theoretische und angewandte Genetik2009
Construction of a reference molecular linkage map of globe artichoke (Cynara cardunculus var. scolymus).
Article in TAG. Theoretical and applied genetics. Theoretische und angewandte Genetik, 2009. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 13 papers.
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Who cites it
13 citing papers in PubMed, 45 citations in OpenAlex.
- Marginal Lands to Grow Novel Bio-Based Crops: A Plant Breeding Perspective.Frontiers in plant science · 2020Review
- High density SNP mapping and QTL analysis for time of leaf budburst in Corylus avellana L.PloS one · 2018Article
- Genome reconstruction in Cynara cardunculus taxa gains access to chromosome-scale DNA variation.Scientific reports · 2017Article
- GBS-based single dosage markers for linkage and QTL mapping allow gene mining for yield-related traits in sugarcane.BMC genomics · 2017Article
- The genome sequence of the outbreeding globe artichoke constructed de novo incorporating a phase-aware low-pass sequencing strategy of F1 progeny.Scientific reports · 2016Article
- Location of chlorogenic acid biosynthesis pathway and polyphenol oxidase genes in a new interspecific anchored linkage map of eggplant.BMC plant biology · 2014Article
- Leaf polyphenol profile and SSR-based fingerprinting of new segregant Cynara cardunculus genotypes.Frontiers in plant science · 2014Article
- Construction of a reference genetic linkage map for carnation (Dianthus caryophyllus L.).BMC genomics · 2013Article
- Integrated consensus genetic and physical maps of flax (Linum usitatissimum L.).TAG. Theoretical and applied genetics. Theoretische und angewandte Genetik · 2012Article
- Genetic mapping and identification of QTL for earliness in the globe artichoke/cultivated cardoon complex.BMC research notes · 2012Article
- RAD tag sequencing as a source of SNP markers in Cynara cardunculus L.BMC genomics · 2012Article
- Genetic map of artichoke × wild cardoon: toward a consensus map for Cynara cardunculus.TAG. Theoretical and applied genetics. Theoretische und angewandte Genetik · 2011Article
- Ontology and diversity of transcript-associated microsatellites mined from a globe artichoke EST database.BMC genomics · 2009Article
Corrections and comments
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Authors and funding
6 authors at 2 institutions in 1 country.
Funding
No grant is acknowledged in the PubMed record.
Abstract
The genome organization of globe artichoke (Cynara cardunculus var. scolymus), unlike other species belonging to Asteraceae (=Compositae) family (i.e. sunflower, lettuce and chicory), remains largely unexplored. The species is highly heterozygous and suffers marked inbreeding depression when forced to self-fertilize. Thus a two-way pseudo-testcross represents the optimal strategy for linkage analysis. Here, we report linkage maps based on the progeny of a cross between globe artichoke (C. cardunculus var. scolymus) and cultivated cardoon (C. cardunculus var. altilis). The population was genotyped using a variety of PCR-based marker platforms, resulting in the identification of 708 testcross markers suitable for map construction. The male map consisted of 177 loci arranged in 17 major linkage groups, spanning 1,015.5 cM, while female map was built with 326 loci arranged into 20 major linkage groups, spanning 1,486.8 cM. The presence of 84 loci shared between these maps and those previously developed from a cross within globe artichoke allowed for map alignment and the definition of 17 homologous linkage groups, corresponding to the haploid number of the species. This will provide a favourable property for QTL scanning; furthermore, as 25 mapped markers (8%) correspond to coding regions, it has an additional value as functional map and might represent an important genetic tool for candidate gene studies in globe artichoke.
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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.